Gene Information

Name : PFL_2292 (PFL_2292)
Accession : YP_259399.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Virulence
Product : fec operon regulator FecR
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3712
EC number : -
Position : 2552445 - 2553416 bp
Length : 972 bp
Strand : +
Note : identified by similarity to SP:P23485; similarity to PIR:S46356; match to protein family HMM PF04773

DNA sequence : 
ATGAGTTTTGCCGGCCTGCAACTGAGCGTCGGCGAGCGCCAGGCCATCAGCGGCGCGGCACGCTGGTACGCGCAATTGCG
CTCCGGCAGCGCCAGCGAGCAGGAGCAGGCCGCCTGGCGCGAATGGCTGGCCGCCGACCCCTTGCACCGCCAGGCGTGGG
AGCGCATGCAGCAACTGGGCGAGCAGATGTCGGCACTGCCCGGCGGCCTGGCCGGTTCCACCTTGCGCGGGGCAGGGCGC
TCGCGCCGCGAGCTGATGCGCAACCTGGTGGTGCTGGCCTCGGCCGGTTCCCTGGGCTGGCTGGGCTGGCGCAGCGACAG
CGCCCAGCAACTGCTGGCGGATTATCGCACCCAGATCGGCGAGCGCCGGCAAGTGCGCCTGGCGGACGGCACTTCGCTGC
TGCTCAATACCAACACCTCGATCAACGTGCAGTTCGACAGCCAGCAACGCAAGGTGCAGCTGTTGTGGGGCGAGATGCTG
GTCAGCACCGCTGCCGATCCCTTGCAGCGGCCGTTCCGGGTCTTCACCCGGGACGCCGAGGTGTTGGCCCTGGGAACTCG
CTTCGTGCTGCGCAGCGATGAGCGTGAGGAGCAGGTGGCGGTGCTGGAGCACGCGGTGCAGGTCAGCCTGGGCGCAGGCC
TTGCGCCGCGTCGGGTCGAGGCCGGCCAGCAACTGGCGTTCAGCGCCGGGGGCTTTGCCGCGCTGCGGCCCAACGATGCC
GCGGTGGGTGCCTGGCGCCAGGGCAGCATCATCGCCATCGACCGGCCCCTGGGGGAATTGCTGGCCGACCTGTCGCGCTA
CCGCCGCGGGGTTGTGCAGTGCGATCCGCAGATTGCCGGGCTGAAGATCTCCGGGGCCTTCCCCATCGATGACACCGACC
GCGCCCTGGCGGCGCTGGAAAGCGGTTTCTCCCTGCAGATCAAGCGCTACACCCGCTACTGGGTACGGGTTTGCGATAGC
CGCGTGGGTTGA

Protein sequence : 
MSFAGLQLSVGERQAISGAARWYAQLRSGSASEQEQAAWREWLAADPLHRQAWERMQQLGEQMSALPGGLAGSTLRGAGR
SRRELMRNLVVLASAGSLGWLGWRSDSAQQLLADYRTQIGERRQVRLADGTSLLLNTNTSINVQFDSQQRKVQLLWGEML
VSTAADPLQRPFRVFTRDAEVLALGTRFVLRSDEREEQVAVLEHAVQVSLGAGLAPRRVEAGQQLAFSAGGFAALRPNDA
AVGAWRQGSIIAIDRPLGELLADLSRYRRGVVQCDPQIAGLKISGAFPIDDTDRALAALESGFSLQIKRYTRYWVRVCDS
RVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecR AAL08457.1 FecR Virulence SRL Protein 2e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PFL_2292 YP_259399.1 fec operon regulator FecR VFG1048 Protein 1e-58 41