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Name : dnaQ (PFL_3294) Accession : YP_260399.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 3802474 - 3803223 bp Length : 750 bp Strand : - Note : identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573; match to protein family HMM TIGR01406 DNA sequence : ATGGCCAACAGATCTGTTGTACTCGATACCGAAACCACCGGCATGCCGGTGACCGACGGCCACCGGATCATTGAAATCGG TTGCGTCGAGTTGATCGGTCGGCGCCTGACCGGCCGGCACTTCCACGTTTACCTGCAACCGGATCGCGAGAGCGATGAGG GCGCCATCGGCGTCCACGGCATCACCAACGAATTCCTGGTGGGCAAGCCGCGTTTCGCCGAAGTCGCCGACGAGTTCTTC GACTTCATCCAGGGCGCGCAGCTGATCATCCACAACGCGGCGTTCGACGTTGGCTTCATCAACAACGAATTCGCCTTGAT GGGCCAGCACGAACGGGCCGACATCACCCAGCACTGCACCATCCTCGACACCCTGATGATGGCCCGCGAGCGGCACCCGG GGCAGCGCAACAGCCTCGACGCCCTGTGCAAACGCTACGGCGTCGACAACTCCGGCCGTGAACTGCACGGCGCCTTGCTC GACTCGGAGATCCTGGCCGACGTCTACCTGACCATGACCGGTGGCCAGACCAGCCTGTCCCTGGCGGGCAATGCCTCGGA CGGCAACGGCTCTGGCGAGGGGGCCGGCCAGGCTTCGGAAATCCGCCGCTTGCCGGCCGATCGCCCGCGCGGGCGGATCA TCCAGGCCAGCGACGCCGAACTGGCCGAGCACCAGGTGCGCCTGGAAATCATCGCCAAGTCCGCCGGTGCCCCGGCGCTC TGGACCCAGTTGCTCGAAACCCAGCAGTAA Protein sequence : MANRSVVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIGVHGITNEFLVGKPRFAEVADEFF DFIQGAQLIIHNAAFDVGFINNEFALMGQHERADITQHCTILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALL DSEILADVYLTMTGGQTSLSLAGNASDGNGSGEGAGQASEIRRLPADRPRGRIIQASDAELAEHQVRLEIIAKSAGAPAL WTQLLETQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 9e-60 | 55 |
