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Name : rnhA (PFL_3297) Accession : YP_260402.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 3804857 - 3805309 bp Length : 453 bp Strand : - Note : identified by match to protein family HMM PF00075 DNA sequence : ATGAGCGATAGCGTAGAAATCTTTACCGACGGTGCCTGCAAGGGCAATCCCGGCCCCGGTGGCTGGGGCGCGCTGCTGGT GTGCAAGGGCGTCGAAAAGGAGCTCTGGGGCGGCGAAGCCAACACCACCAACAACCGTATGGAGCTGATGGCGGCGATCC GCGGCCTGGAAGAGCTCAAGCGCCAGTGCGATGTGCAACTGGTCACCGACTCGCAGTATGTGATGAAGGGCATCAACGAG TGGATGGCCAACTGGAAGAAGCGCGGCTGGAAGACCGCCGCCAAGGAGCCGGTGAAGAATGCCGACCTGTGGCAGCAGCT CGACGAACAGGTCAACCGCCACAACGTCACCTGGAAATGGGTGCGCGGCCACACCGGCCATCACGGCAACGAGCGGGCCG ACCAGTTGGCCAACCGCGGTGTCGACGAGGTCCGCGGCTACAAGCAGCCCTGA Protein sequence : MSDSVEIFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELMAAIRGLEELKRQCDVQLVTDSQYVMKGINE WMANWKKRGWKTAAKEPVKNADLWQQLDEQVNRHNVTWKWVRGHTGHHGNERADQLANRGVDEVRGYKQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-38 | 59 |
