Gene Information

Name : PFL_3432 (PFL_3432)
Accession : YP_260536.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : HAD hydrolase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0560
EC number : -
Position : 3948949 - 3949563 bp
Length : 615 bp
Strand : +
Note : identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01490

DNA sequence :
GTGCTCTCGGTGTTCGATTTCGACGGCACCCTGACCTGCCATGACAGCTTCGTACCCTTTCTCAGGTTTGCCTTCGGCCA
CCGCCAGTTCAACCGGCGGATACTCGGCCTGGCCCTGCCCAGCCTGAGGTTCCTGGTACGCCGGGTCGATCGCGACCAGC
TCAAGGCGCAACTGATCAGCACCTTCCTCACAGGCGTCGAGGCCGCCTGGCTCCAGCAGCGGGCAGAAGCTTTCTGCCAG
CAGGCCTGGAACCGACTGATGCGCCCGGCGGGCCTGCAGGCGGTGGCCCAGGAGCTGCGCTCAGGCGCCCTGGTAACCCT
GTGCTCTGCCTCCCCGGCCCTGGTCCTGCAACCTTTCGCCACACGCCTGGGGATCAGCTTGATCGGCACCGAACTGGAGG
TGGTCGACGGCATACTGAGCGGGCGTATCACCGGCAACAATTGCCGTTGCCAGAACAAGGTCCTGCGCCTGGAAAGCGTC
TACGGTCCGCTGAACCAGTATCGGCTCCGGGCCTGGGGCGATACCCGCGGCGACCGTGAGCTGCTGGCTGCAGCCCAGGA
CGCCCACTGGCGGCACTTTCACCCTTCCTGGCGGCGCGGGCAGCGAGCACGCTGA

Protein sequence :
MLSVFDFDGTLTCHDSFVPFLRFAFGHRQFNRRILGLALPSLRFLVRRVDRDQLKAQLISTFLTGVEAAWLQQRAEAFCQ
QAWNRLMRPAGLQAVAQELRSGALVTLCSASPALVLQPFATRLGISLIGTELEVVDGILSGRITGNNCRCQNKVLRLESV
YGPLNQYRLRAWGDTRGDRELLAAAQDAHWRHFHPSWRRGQRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACY75547.1 HAD-superfamily hydrolase subfamily IB Not tested Tn6060 Protein 6e-74 76