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Name : cspD (PFL_3887) Accession : YP_260987.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : cold shock domain-containing protein CspD Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 4485991 - 4486248 bp Length : 258 bp Strand : + Note : identified by similarity to SP:P24245; match to protein family HMM PF00313; match to protein family HMM TIGR02381 DNA sequence : ATGGCTAGCGGTAAGGTCAAGTGGTTCAACAACGCCAAGGGTTATGGCTTTATTAATGAGGAGGGCAAGACTGACGATCT GTTTGCCCATTACTCGGCCATCGATATGGATGGCTACAAGACCTTGAAAGCCGGACAGGCTGTGAGCTTCGAGATCATCC AAGGGCCCAAGGGCCTGCATGCGATCAAAATCAGCGCGTTGAAGGTGCCCGGCGAAATCGTCACCGCCGAGGCCCAGCCC GAAAGTGCCCTGAGCTGA Protein sequence : MASGKVKWFNNAKGYGFINEEGKTDDLFAHYSAIDMDGYKTLKAGQAVSFEIIQGPKGLHAIKISALKVPGEIVTAEAQP ESALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 3e-13 | 51 |
