Gene Information

Name : cysB (PFL_4268)
Accession : YP_261360.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : transcriptional regulator CysB
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 4964903 - 4965877 bp
Length : 975 bp
Strand : -
Note : identified by similarity to SP:P45600; match to protein family HMM PF00126; match to protein family HMM PF03466

DNA sequence :
ATGAAGCTTCAACAATTGCGCTACATCTGGGAAGTGGCGCACCACGACCTCAACGTCTCCGCTACCGCGCAAAGCCTTTA
CACATCGCAACCGGGTATCAGCAAGCAGATCCGTCTGCTCGAGGACGAACTCGGGGTCGAGGTCTTTGCCCGCAGTGGCA
AGCATCTGACCCGCGTGACCCCGGCCGGCGAGCGCATCATCACCACCGCCGGCGAGATCCTGCGCAAGGTCGAAAGCATC
AAGCAGATCGCCCAGGAGTTCTCCAACGAGAAGAAGGGCACCCTGTCCATCGCCACTACTCACACCCAGGCGCGCTACGC
CTTGCCACCGGTGATCAGCAGCTTTATCAAGCAGTACCCGGATGTGGCCTTGCACATGCATCAGGGTTCGCCGATGCAGA
TTGCCGAAATGGCCGCTGACGGCACTGTGGATTTCGCCATCGCTACCGAGGCCCTGGAGTTGTTCGGTGACCTGGTGATG
ATGCCGTGCTATCGCTGGAACCGCTGCGTGGTAGTGCCTCAGGGCCACCCGCTGACCAAGCTGCCGAAGTTGACCTTGGA
AACCCTGGCCGAGTACCCGATCGTCACTTACGTGTTCGGTTTTACCGGTCGTTCCAAGTTGGACGAAGCCTTCAGCCATC
GCGGCCTGACGCCCAAGGTGGTATTCACCGCTGCCGACGCCGACGTGATCAAGACCTATGTGCGCCTGGGCCTGGGCGTG
GGCATCGTGGCCAAGATGGCGGTCGACACCAAGCTCGACAGCGACCTGGTGGTGCTGGATGCCAGTGAACTGTTCGAATC
GAGCATCACCAAGATCGGTTTCCGTCGCGGCACTTTCCTGCGTGGCTTCATGTGCGATTTCATCGAGAAGTTCGCCCCGC
ACCTGACCCGCGAAGTCATGGCCAAGGCCATTGCCTGCCATAACAAGCAGGAACTGGAAGAGCTGTTCGACGGCGTCGAA
TTGCCGGTCCACTGA

Protein sequence :
MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVTPAGERIITTAGEILRKVESI
KQIAQEFSNEKKGTLSIATTHTQARYALPPVISSFIKQYPDVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVM
MPCYRWNRCVVVPQGHPLTKLPKLTLETLAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV
GIVAKMAVDTKLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVMAKAIACHNKQELEELFDGVE
LPVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 7e-59 42