|
Name : gap_2 (PFL_4623) Accession : YP_261707.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : glyceraldehyde-3-phosphate dehydrogenase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.12 Position : 5334325 - 5335329 bp Length : 1005 bp Strand : + Note : identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534 DNA sequence : ATGACTCTTCGAATCGCAATCAATGGTTTTGGCCGTATCGGCCGTAACGTCCTGCGCGCACTTTATACCCAAGGCTATCG CCAGGATCTGCAGATCGTCGCTATCAACGATCTCGGAGACAGCGCTATCAATGCCCACCTGCTGAAATACGACACCGTGC ACGGCACTTTCGACGCCCAAGTCGAACACGATCAGGAAAGCCTCACCGTGAATGGCGACCGGATTGCCGTCAGCGCCATC CGCAACCCGGCCGAACTGCCCTGGGCCGCGGAGAAGATCGACGTGGTGTTCGAATGCACCGGCCTGTTCACCGACCGCGC CAAGGCTGCCGCCCATCTGACCGCCGGTGCCCGCAAGGTCATCATCTCGGCCCCGGCCAAGGGCGCCGACGCCACCGTGG TCTACGGGGTCAACCACGACATTCTGCGCCAGTCGCACCAGATCATCTCCAACGCCTCGTGCACCACCAACTGCCTGGCG CCAGTGGCCCAGGTACTGCACCGCGAGCTGGGCATCGACAACGGCCTGATGACCACCATCCACGCCTACACCAACGACCA GAACCTCACCGACGTCTACCACAGCGACCCCTATCGCGCCCGTTCGGCCACCCAGAACATGATCCCGAGCAAGACCGGCG CTGCCGAAGCGGTGGGCCTGGTGCTGCCGGAGCTGGCTGGCAAGCTGACCGGCATGGCCGTGCGAGTACCGGTGATCAAC GTGTCCCTGGTGGACCTGACGGTGACCCTCAAGCGCGACACCACCGCCGAAGAGGTCAATGCCTTGCTCAAGAGCGCCAG CCAGCACTCGACGATCCTCGGCTACAACACCCTGCCGCTGGTCTCCAGCGACTTCAACCACAATCCGCTGTCGTCGATCT TCGACGCCAACCACACCAAGGTCAGCGGTGGCCGGTTGCTCAAGGTGCTGGCCTGGTACGACAACGAGTGGGGTTTCTCC AACCGCATGCTGGATAACTGCCTGGCCCTGTGCAACGCGGAATAA Protein sequence : MTLRIAINGFGRIGRNVLRALYTQGYRQDLQIVAINDLGDSAINAHLLKYDTVHGTFDAQVEHDQESLTVNGDRIAVSAI RNPAELPWAAEKIDVVFECTGLFTDRAKAAAHLTAGARKVIISAPAKGADATVVYGVNHDILRQSHQIISNASCTTNCLA PVAQVLHRELGIDNGLMTTIHAYTNDQNLTDVYHSDPYRARSATQNMIPSKTGAAEAVGLVLPELAGKLTGMAVRVPVIN VSLVDLTVTLKRDTTAEEVNALLKSASQHSTILGYNTLPLVSSDFNHNPLSSIFDANHTKVSGGRLLKVLAWYDNEWGFS NRMLDNCLALCNAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 2e-76 | 47 |
