|
Name : PFL_4693 (PFL_4693) Accession : YP_261776.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : - COG ID : - EC number : - Position : 5423444 - 5424187 bp Length : 744 bp Strand : + Note : identified by match to protein family HMM TIGR03759 DNA sequence : ATGAATCTAAAGATTCTCTGCACCCTCGCGTGCTACCTGATCTCCACGGCTTACGCCGCAACAGCACCGGTAGCTGCAGG CCAGGCATCACAGCTCCACTTCACCGCCGAAGGCGAATCATCACAGAGAAGGCTCCAGGACAAGGCAGCAGATGCGTGGG GGATCTCCGCCCAAGAGTACGAGCGGTACCAGGATGTGATGCAGGGGCCGCGGGGGGTGTACTCGCCGGGGCTGGACCCG CTGACTGCCCTGGGTATCGAAGCCCGCTCTGAAGAGGAACGCCGGCGCTATGCGGAGCTGCAAGTAAAAACCGAGAGGCA ACGTGTAGAAAAAGAGTTGTCGTATCAGCGCGCATACGATGAAGCGTTCAGGAGGCTGTACCCGAACGAGAAAGCGATCG AAATCTCCTCGGCAACCCTGACCACTCCAACAGCAAACAGCTCACCGTTGCTGCAGGGAGACGGTCGCCTGGCGATCTTT GTGAAAGACAACTGCGTTGCGTGCATCGACGAAGTGAAGAAGCTACAAGCATCTCAGGCACCTTTCGACCTCTACTTCGT CGGCAGCCAGGGCGATGACGAGCGCATCCGGCGATGGGCAATTCTCGCTGGCGTCGACCCTGTCAACGTCAAGAGCCGAC GAATCACCCTCAACCATGACCAAGGTCGCTGGCTCGGCCTTGGCCTGGGCGGTGAACTCCCAGCGGCAGTAAAACAGGTG AATGGCCAATGGCGCCGTCAGTAA Protein sequence : MNLKILCTLACYLISTAYAATAPVAAGQASQLHFTAEGESSQRRLQDKAADAWGISAQEYERYQDVMQGPRGVYSPGLDP LTALGIEARSEEERRRYAELQVKTERQRVEKELSYQRAYDEAFRRLYPNEKAIEISSATLTTPTANSSPLLQGDGRLAIF VKDNCVACIDEVKKLQASQAPFDLYFVGSQGDDERIRRWAILAGVDPVNVKSRRITLNHDQGRWLGLGLGGELPAAVKQV NGQWRRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph69 | CAI36110.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 1e-50 | 66 |
| EXA51 | ABD94660.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-53 | 65 |
| RL051 | AAP84177.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 7e-54 | 62 |
| unnamed | ABR13379.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-53 | 61 |
| ORF C68 | AAN62162.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-44 | 58 |
| ORF SG71 | AAN62293.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-35 | 53 |
| STY4558 | NP_458644.1 | putative exported protein | Not tested | SPI-7 | Protein | 1e-29 | 47 |
| t4256 | NP_807854.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-29 | 47 |
| PMI2592 | YP_002152311.1 | hypothetical protein | Not tested | Not named | Protein | 2e-25 | 41 |
| Pmu_03220 | YP_005176221.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 1e-26 | 41 |
