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Name : iscS (PFL_4965) Accession : YP_262045.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 2.8.1.7 Position : 5717451 - 5718665 bp Length : 1215 bp Strand : - Note : identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR02006 DNA sequence : ATGAAATTGCCGATTTACCTTGATTACTCAGCGACCACCCCGGTTGATCCGCGCGTCGCGCAGAAAATGAGTGAATGCCT GCTGGTCGACGGGAACTTCGGTAACCCGGCGTCCCGCTCCCACGTGTTTGGCTGGAAAGCCGAAGAATCGGTGGAAAACG CCCGTCGCCAAGTGGCCGACCTGGTTAACGCCGACCCGCGTGAAATCGTCTGGACTTCCGGTGCTACCGAATCCGACAAC CTGGCAATCAAGGGTGTCGCGCATTTCTACCACACCAAGGGCAAGCACCTGATCACCTCGAAGATCGAGCACAAGGCTGT CCTGGACACCATGCGCCAACTCGAGCGTGAAGGCTTCGAAGTGACCTACATCGAGCCGGGCGAAGACGGCCTCATCACTC CGGCCATGGTCGAAGCAGCCCTGCGTGACGACACCATCCTGGTTTCGATCATGCATGTGAACAACGAGATCGGCACCATC AACGACATCGCTGCCATCGGCGAACTGACCCGCTCCAAGGGCGTGTTGTTCCACGTCGACGGCGCTCAGTCCACCGGCAA GGTCGACATCGACCTGCAGGCCCTGAAGGTCGACCTGATGTCCTTCTCCGCCCACAAGACCTACGGCCCGAAAGGGATCG GCGCGCTGTACGTCAGCCGCAAGCCGCGGGTGCGCCTGGAAGCCACCATGCACGGCGGTGGTCACGAACGCGGCATGCGT TCCGGCACCCTGGCTACTCACCAGATCGTCGGCATGGGCGAAGCCTTCCACGTGGCCAAGGAAGACATGGCTGCCGAGAA CCTGCGCATCAAGGCCCTGAGCGACCGCTTCTACAAGCAGGTCGAGCACCTGGAAGAGCTGTACATCAACGGCAGCATGA CTGCCCGCGTACCGCACAACCTGAACCTGAGCTTCAACTACGTTGAAGGCGAGTCGCTGATCATGGCCCTCAAGGACCTG GCAGTGTCTTCCGGTTCGGCCTGTACTTCGGCCTCCCTGGAGCCTTCCTACGTGCTGCGTGCCCTGGGTCGCAACGACGA GCTGGCTCACAGCTCGATCCGCTTCACCTTCGGCCGCTTCACCACTGAAGAAGAAATCGATTACGCGGCGCAGAAAGTCT GCGAAGCCGTTACCAAGCTGCGCGCTCTGTCGCCGCTGTGGGACATGTACAAAGATGGCGTCGATATCTCGAAGATCGAG TGGGCGGCGCACTGA Protein sequence : MKLPIYLDYSATTPVDPRVAQKMSECLLVDGNFGNPASRSHVFGWKAEESVENARRQVADLVNADPREIVWTSGATESDN LAIKGVAHFYHTKGKHLITSKIEHKAVLDTMRQLEREGFEVTYIEPGEDGLITPAMVEAALRDDTILVSIMHVNNEIGTI NDIAAIGELTRSKGVLFHVDGAQSTGKVDIDLQALKVDLMSFSAHKTYGPKGIGALYVSRKPRVRLEATMHGGGHERGMR SGTLATHQIVGMGEAFHVAKEDMAAENLRIKALSDRFYKQVEHLEELYINGSMTARVPHNLNLSFNYVEGESLIMALKDL AVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTFGRFTTEEEIDYAAQKVCEAVTKLRALSPLWDMYKDGVDISKIE WAAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 0.0 | 94 |
