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Name : trmJ (PFL_4968) Accession : YP_262048.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : 2.1.1.- Position : 5720224 - 5720997 bp Length : 774 bp Strand : - Note : identified by similarity to SP:P0AE01; match to protein family HMM PF00588; match to protein family HMM TIGR00050 DNA sequence : TTGCTGCAGAACATTCGTGTCGTCCTGGTCAATACCAGTCATCCGGGCAATATCGGCGGGGCTGCGCGTGCCATGAAGAA CATGGGCTTGTCGCGGCTGGTGCTGGTGGAGCCGCGGGTATTTCCGTCCCATGAGGCGGATGCGCGGGCTTCTGGTGCCA CCGATATTCTCGAAAATGCCCAGGTGGTGGCGACGCTGGAGGATGCTCTGGCGGGTTGCACCCTGGTGTTCGGCACCAGC GCTCGTGATCGGCGCATTCCCTGGCCGCTGCTGGATCCCCGCGAGTCGGGCCTCAAGGTCGTGGAGGAGGCCGGGCAGGG GGCGCAGGTCGCTCTGGTGTTCGGTCGTGAAGATTCCGGCCTGACCAATGACGAACTGCAGCGATGTCATTTCCATGTGC ATATCCCGTCGGATCCGGAGTTCAGCTCGTTGAACCTGGCCACGGCGGTGCAAGTGCTGGCCTATGAAGTGCGCATGTCC TGGTTGGCAGCCCAGGGCCAGCCGAGCAAGGTGGAGAAGGATGAGGTGGCGTCGCCGCGCAGTGATGAGCTGGCAACCAT GGATGAGCTGGAGCGGTTCTACGAGCACCTGCAGCAAACCCTGGTGGCCATCGACTTCCTCGATCCGGAGAAACCTCGAC ACTTGATGGCGCGCTTGCGTCGGTTGTACGGTCGCAGCTCGGTCAGCCGGGCGGAAATGAATATATTGCGAGGCATCCTC ACGGAAACCCAGAAAGCGGCTCGTGGGGAGCTACAGAAGCGGAAGGATCAGTGA Protein sequence : MLQNIRVVLVNTSHPGNIGGAARAMKNMGLSRLVLVEPRVFPSHEADARASGATDILENAQVVATLEDALAGCTLVFGTS ARDRRIPWPLLDPRESGLKVVEEAGQGAQVALVFGREDSGLTNDELQRCHFHVHIPSDPEFSSLNLATAVQVLAYEVRMS WLAAQGQPSKVEKDEVASPRSDELATMDELERFYEHLQQTLVAIDFLDPEKPRHLMARLRRLYGRSSVSRAEMNILRGIL TETQKAARGELQKRKDQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 2e-98 | 79 |
