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Name : secF (PFL_4971) Accession : YP_262051.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecF Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0341 EC number : - Position : 5722863 - 5723777 bp Length : 915 bp Strand : - Note : identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966 DNA sequence : ATGTTACGTACTATTAACTTCATGGGCGTACGCAACGTTGCGTTCGGCGTCACTGTGCTGCTCACCATCCTGGCGTTGTT CAGCTGGTTCCACAAAGGCTTGAACTACGGTCTGGACTTCACCGGCGGTACGCTCATCGAGCTGACCTACGAGCGTCCGG CGGATGTGATGAAGGTGCGTTCGCAGCTGAACGACGCCGGTTATCACGAAGCCATCGTGCAGAGCTTCGGTGCGACCACC GACCTGCTGGTGCGGATGCCGGGCGAAGACCCGCAACTGGGCCACCAGGTGGCTGAAGCGCTACAGAAGGTTGGCGGTGA CAACCCGGCGCAGGTCAAGCGCGTCGAGTTCGTCGGCCCGCAGGTGGGTGAAGAGCTGCGCGACCAGGGTGGCCTCGGCA TGCTCATGGCGCTGGGCGGCATCCTCATCTACCTGGCGTTCCGCTTCCAGTGGAAGTTCGCGGTCGGTGCCATCGTCTCG CTGATCCACGACGTGATCGTGACCGTGGGCATCCTGTCGTTTTTCCAGATCACCTTCGACCTGACGGTGCTGGCGGCGGT GCTGGCGATCATCGGTTACTCGCTCAACGACACCATCGTGGTGTTCGACCGGGTGCGTGAGAACTTCCGTGTGCTGCGCA AGGCCAGCCTGATCGAGAACATCAACATCTCGACCACCCAGACCCTGCTGCGCACCATGGCCACTTCGATCTCCACCCTG CTGGCGATCGTGGCCCTGCTGTTCTTCGGTGGCGACAACCTGTGGGGCTTCTCCATCGCCCTGTTCGTCGGTGTGTTGGC GGGTACCTACTCGTCGATCTACATCGCCAACGTGGTGCTGATCTGGCTGAACCTGAACAGTGAAGACCTGATTCCTCCGG CCAATACCGAGAAGGAAGTGGACGACCGTCCTTGA Protein sequence : MLRTINFMGVRNVAFGVTVLLTILALFSWFHKGLNYGLDFTGGTLIELTYERPADVMKVRSQLNDAGYHEAIVQSFGATT DLLVRMPGEDPQLGHQVAEALQKVGGDNPAQVKRVEFVGPQVGEELRDQGGLGMLMALGGILIYLAFRFQWKFAVGAIVS LIHDVIVTVGILSFFQITFDLTVLAAVLAIIGYSLNDTIVVFDRVRENFRVLRKASLIENINISTTQTLLRTMATSISTL LAIVALLFFGGDNLWGFSIALFVGVLAGTYSSIYIANVVLIWLNLNSEDLIPPANTEKEVDDRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secF | AAT96066.1 | SecF | Not tested | T-PAI | Protein | 2e-110 | 89 |
| secF | AAT96102.1 | SecF | Not tested | T-PAI | Protein | 3e-110 | 88 |
