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Name : glcB (PFL_5700) Accession : YP_262758.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : malate synthase G Function : - COG functional category : C : Energy production and conversion COG ID : COG2225 EC number : 2.3.3.9 Position : 6496558 - 6498735 bp Length : 2178 bp Strand : + Note : identified by match to protein family HMM PF01274; match to protein family HMM TIGR01345 DNA sequence : ATGACTGAGCACGTTCAAGTCGGTGGCCTGCAGGTCGCCAGAGTCCTGTTCGACTTCGTGAACAACGAAGCCATTCCCGG TACCGGCCTCACCGCCGACTCGTTCTGGGCCGGTGCAGACAAGGTCATTCACGACCTGGCGCCGAAGAACAAAGCCCTAC TCGCCAAACGCGATGACTTCCAGGCACGTATCGATGCCTGGCACCAGTCCCGTGCCGGCCAGGCGCATGACGCTGTGGCT TATAAAGCCTTCTTGCAAGACATCGGTTACCTGCTGCCAGAAGCGGCGGATTTCCAGGCCACGACGCAAAACGTCGATGA AGAGATCGCCCACATGGCCGGCCCGCAGTTGGTGGTGCCGGTGATGAATGCGCGCTTCGCCCTCAACGCTTCCAACGCTC GCTGGGGCTCGCTGTACGACGCCCTGTACGGCACCGATGCCATCAGCGAAGCCGATGGTGCGGAAAAAGGCAAAGGCTAC AACAAGGTCCGCGGCGACAAGGTCATCGCCTTCGCCCGCGCCTTCCTCGATGAATCCGCGCCGCTGACTGCCGGCTCCCA CGTGGACTCGGTGAGCTACAAGATCGTCGGCGGCAAGCTGGTGGTCGGCCTCAAGGGTGGCAGCAACAGCGGCCTGCGCA ACGACGCGCAACTGATCGGCTACCAGGGCGACGCTGCGGCCCCTACCGCGATCCTGCTCAAGCACAACGGCCTGCACTTC GAGATCCAGATCGACGCCACAAGCCCGGTCGGCCAGACCGACGCCGCCGGGGTCAAGGACCTGCTGATGGAAGCGGCCCT GACCACCATCATGGACTGCGAAGACTCGGTCGCCGCAGTGGATGCCGACGACAAGGTGGTGATCTACCGCAACTGGCTCG GCCTGATGAAGGGCGACCTGGCGGAAGAAGTTTCCAAGGGCGGCAAGTCCTTCACCCGCACCATGAACGCCGACCGCGAA TACACCGGGGTCAATGGCGAGCCGGTGAAACTGCACGGTCGTTCGCTGCTGTTCGTGCGCAACGTCGGCCACCTGATGAC CATCGATGCGATCCTCGACAAGGATGGCAACGAAGTGCCGGAAGGCATCCTCGACGGCCTGGTCACCAGCCTGGCGTCGA TCCACAACCTCAACGGCAACACGTCGCGCAAGAACAGCCGCACCGGCTCGATGTACATCGTCAAGCCGAAGATGCACGGC CCTGAAGAAGCGGCGTTCACCAACGAGCTGTTCGGCCGCATCGAAGAGGTGCTGAACCTGCCGCGCAACACCCTGAAAGT CGGGATCATGGACGAGGAGCGCCGCACCACGGTCAACCTCAAGGCCTGCATCAAGGCGGCCAGCGAGCGCGTGGTGTTCA TCAACACCGGCTTCCTCGACCGCACCGGCGACGAAATCCACACCTCCATGGAGGCCGGCGCCATGGTGCGCAAGGCCGAC ATGAAGGCCGAGAAATGGATCGGCGCCTACGAGAACTGGAACGTCGATATCGGCCTGAGCACCGGCCTGCAAGGTCGCGC GCAAATCGGCAAGGGCATGTGGGCGATGCCGGACCTGATGGCAGCGATGCTCGAACAGAAAATCGCTCACCCACTGGCCG GCGCCAACACTGCCTGGGTTCCATCCCCGACCGCCGCTGCGCTGCACGCGCTGCACTATCACAAGGTCGACGTATTCGCC CGCCAGGCCGAACTGGCCAAGCGTGCCCGCGCCTCGGTGGATGACATCCTGACCATCCCGCTGGCGGTCAACCCGAGCTG GACGCCGGAGCAGATCAAGAACGAACTGGACAACAACGCCCAGGGCATTCTCGGTTACGTGGTGCGCTGGATCGACCAGG GCGTGGGCTGTTCGAAAGTGCCGGACATCAATGACGTCGGCCTGATGGAAGACCGCGCCACCCTGCGTATCTCCAGCCAG CACATCGCCAACTGGCTGCGCCACGGCGTGGTCACCCAGGAGCAGGTGCTCGAAAGCCTCAAGCGCATGGCTCCGGTGGT TGACCGGCAGAACGCCAGCGACCCGCTGTACCGTCCTCTGGCACCGGACTTCGACAGCAACATCGCCTTCCAGGCCGCCC TGGAACTGGTGATCGAAGGCACCAAGCAGCCAAACGGCTACACCGAGCCGGTCCTGCACCGCCGGCGTCGCGAGTTCAAG GCCAAGAACGGTCTGTAA Protein sequence : MTEHVQVGGLQVARVLFDFVNNEAIPGTGLTADSFWAGADKVIHDLAPKNKALLAKRDDFQARIDAWHQSRAGQAHDAVA YKAFLQDIGYLLPEAADFQATTQNVDEEIAHMAGPQLVVPVMNARFALNASNARWGSLYDALYGTDAISEADGAEKGKGY NKVRGDKVIAFARAFLDESAPLTAGSHVDSVSYKIVGGKLVVGLKGGSNSGLRNDAQLIGYQGDAAAPTAILLKHNGLHF EIQIDATSPVGQTDAAGVKDLLMEAALTTIMDCEDSVAAVDADDKVVIYRNWLGLMKGDLAEEVSKGGKSFTRTMNADRE YTGVNGEPVKLHGRSLLFVRNVGHLMTIDAILDKDGNEVPEGILDGLVTSLASIHNLNGNTSRKNSRTGSMYIVKPKMHG PEEAAFTNELFGRIEEVLNLPRNTLKVGIMDEERRTTVNLKACIKAASERVVFINTGFLDRTGDEIHTSMEAGAMVRKAD MKAEKWIGAYENWNVDIGLSTGLQGRAQIGKGMWAMPDLMAAMLEQKIAHPLAGANTAWVPSPTAAALHALHYHKVDVFA RQAELAKRARASVDDILTIPLAVNPSWTPEQIKNELDNNAQGILGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRISSQ HIANWLRHGVVTQEQVLESLKRMAPVVDRQNASDPLYRPLAPDFDSNIAFQAALELVIEGTKQPNGYTEPVLHRRRREFK AKNGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcB | CAE85241.1 | GlcB protein, malate synthase G | Not tested | PAI V 536 | Protein | 0.0 | 59 |
