Gene Information

Name : epd (PFL_5785)
Accession : YP_262843.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : D-erythrose-4-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.72
Position : 6590537 - 6591616 bp
Length : 1080 bp
Strand : -
Note : identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01532

DNA sequence :
ATGCCTCAACCGCGTCCCTACAAAGTTGCACTCAACGGCTACGGCCGGATTGGTCGTTGCGTCTTGCGTGCTCTGTTCGA
GCGAGGGGCTGCGGCCGGGTTCGAGATCGTTGCCATCAACGATCTGGCCGACATGGCCAGCGTCGAATACCTGACACGCT
TCGATTCCACCCACGGGCGTTTTCCCGGTGAGGTGAAGGTCGATGGCGATTGTCTGCATATCAATGGCAACTGCGTGAAA
GTGTTGCGCAGTGCCACCCCCGAAGGCATCGATTGGGCGTCCCTGGGCGTCGATCTGGTGCTGGAATGCTCCGGTGCCTA
CCACACCCGCGAAGACGGCCAGCGTTTTCTCGACGCCGGCGCGCCGCGGGTGCTGTTCTCCCAGCCGATGGCCAGCGAGG
CGGATGTCGACGCCACCATCGTCTATGGGGTGAACCAGGACTGCCTGAGCGGCGACGAACGGCTGGTGTCCAACGCCTCC
TGCACCACCAACTGCGGCGTGCCGCTGTTGCGCCTGCTGGATCAGGCCATTGGCCTGGAGTACGTATCGATCACCACCAT
TCACTCGGCGATGAACGACCAGCCGGTGATCGACGCCTATCACCATGAAGACCTGCGGCGTACCCGTTCGGCCTTCCAGT
CGGTGATCCCGGTGTCCACCGGTCTGGCGCGGGGTATCGAGCGCCTGTTGCCGGAACTTGCCGGGCGAATTCAGGCCAAA
GCAGTGCGGGTGCCGACGGTGAACGTGTCCTGCCTGGACATCACCATGCAGACCGTGAGCGATACCGACGCCACCGAGGT
CAACCGGATCCTGCGCGAGGCCGCCACCAGCGGTCCGCTCAAGGGCCTGCTGGCCTACACCGAGCTGCCGCATGCCAGCT
GTGATTTCAATCATGATCCCCATTCGGCGATCGTCGATGCCAGTCAGACCCGTGTTTCCGGCCCCCGGCTGGTGAACATC
CTGGCCTGGTTCGACAACGAATGGGGCTTTGCCAACCGAATGCTGGACGTAGCTGGGCACTACCTGCACACAGCCGCTCC
ACGCACTGACACTCAACTCTCTGTTTCTGAAGAACAGTAA

Protein sequence :
MPQPRPYKVALNGYGRIGRCVLRALFERGAAAGFEIVAINDLADMASVEYLTRFDSTHGRFPGEVKVDGDCLHINGNCVK
VLRSATPEGIDWASLGVDLVLECSGAYHTREDGQRFLDAGAPRVLFSQPMASEADVDATIVYGVNQDCLSGDERLVSNAS
CTTNCGVPLLRLLDQAIGLEYVSITTIHSAMNDQPVIDAYHHEDLRRTRSAFQSVIPVSTGLARGIERLLPELAGRIQAK
AVRVPTVNVSCLDITMQTVSDTDATEVNRILREAATSGPLKGLLAYTELPHASCDFNHDPHSAIVDASQTRVSGPRLVNI
LAWFDNEWGFANRMLDVAGHYLHTAAPRTDTQLSVSEEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 1e-83 51