Name : epd (PFL_5785) Accession : YP_262843.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : D-erythrose-4-phosphate dehydrogenase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.72 Position : 6590537 - 6591616 bp Length : 1080 bp Strand : - Note : identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01532 DNA sequence : ATGCCTCAACCGCGTCCCTACAAAGTTGCACTCAACGGCTACGGCCGGATTGGTCGTTGCGTCTTGCGTGCTCTGTTCGA GCGAGGGGCTGCGGCCGGGTTCGAGATCGTTGCCATCAACGATCTGGCCGACATGGCCAGCGTCGAATACCTGACACGCT TCGATTCCACCCACGGGCGTTTTCCCGGTGAGGTGAAGGTCGATGGCGATTGTCTGCATATCAATGGCAACTGCGTGAAA GTGTTGCGCAGTGCCACCCCCGAAGGCATCGATTGGGCGTCCCTGGGCGTCGATCTGGTGCTGGAATGCTCCGGTGCCTA CCACACCCGCGAAGACGGCCAGCGTTTTCTCGACGCCGGCGCGCCGCGGGTGCTGTTCTCCCAGCCGATGGCCAGCGAGG CGGATGTCGACGCCACCATCGTCTATGGGGTGAACCAGGACTGCCTGAGCGGCGACGAACGGCTGGTGTCCAACGCCTCC TGCACCACCAACTGCGGCGTGCCGCTGTTGCGCCTGCTGGATCAGGCCATTGGCCTGGAGTACGTATCGATCACCACCAT TCACTCGGCGATGAACGACCAGCCGGTGATCGACGCCTATCACCATGAAGACCTGCGGCGTACCCGTTCGGCCTTCCAGT CGGTGATCCCGGTGTCCACCGGTCTGGCGCGGGGTATCGAGCGCCTGTTGCCGGAACTTGCCGGGCGAATTCAGGCCAAA GCAGTGCGGGTGCCGACGGTGAACGTGTCCTGCCTGGACATCACCATGCAGACCGTGAGCGATACCGACGCCACCGAGGT CAACCGGATCCTGCGCGAGGCCGCCACCAGCGGTCCGCTCAAGGGCCTGCTGGCCTACACCGAGCTGCCGCATGCCAGCT GTGATTTCAATCATGATCCCCATTCGGCGATCGTCGATGCCAGTCAGACCCGTGTTTCCGGCCCCCGGCTGGTGAACATC CTGGCCTGGTTCGACAACGAATGGGGCTTTGCCAACCGAATGCTGGACGTAGCTGGGCACTACCTGCACACAGCCGCTCC ACGCACTGACACTCAACTCTCTGTTTCTGAAGAACAGTAA Protein sequence : MPQPRPYKVALNGYGRIGRCVLRALFERGAAAGFEIVAINDLADMASVEYLTRFDSTHGRFPGEVKVDGDCLHINGNCVK VLRSATPEGIDWASLGVDLVLECSGAYHTREDGQRFLDAGAPRVLFSQPMASEADVDATIVYGVNQDCLSGDERLVSNAS CTTNCGVPLLRLLDQAIGLEYVSITTIHSAMNDQPVIDAYHHEDLRRTRSAFQSVIPVSTGLARGIERLLPELAGRIQAK AVRVPTVNVSCLDITMQTVSDTDATEVNRILREAATSGPLKGLLAYTELPHASCDFNHDPHSAIVDASQTRVSGPRLVNI LAWFDNEWGFANRMLDVAGHYLHTAAPRTDTQLSVSEEQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 1e-83 | 51 |