Gene Information

Name : lolD (SF1121)
Accession : NP_707032.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Resistance
Product : lipoprotein transporter ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1164360 - 1165061 bp
Length : 702 bp
Strand : +
Note : Code: R; COG: COG1136

DNA sequence : 
ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCTCAA
TGTCAGTTTCAGCGTGGGCGAAGGTGAAATGATGGCAATTGTCGGTAGCTCTGGTTCCGGTAAAAGTACCTTGCTGCACC
TGTTAGGCGGGCTGGATACGCCAACCTCCGGCGATGTGATCTTTAACGGTCAGCCGATGAGCAAACTGTCTTCAGCGGCG
AAAGCAGAACTGCGCAACCAGAAGCTGGGCTTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACTGCCCTGGAAAA
CGTGGCTATGCCACTGCTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCTGTGCACTGGAGATGTTAAAAGCGGTGG
GGCTGGAGCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGCGGCGAACGCCAGCGTGTAGCGATTGCCCGTGCGCTG
GTCAATAATCCGCGTCTGGTACTGGCGGATGAACCTACCGGTAACCTCGATGCGCGTAACGCCGACAGCATCTTCCAGTT
GCTTGGGGAGTTGAATCGCTTGCAGGGCACCGCTTTCCTGGTGGTCACTCACGACCTGCAACTGGCGAAACGTATGAGCC
GCCAACTGGAAATGCGTGATGGACGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA

Protein sequence : 
MNKILLQCDNLCKRYQEGSVQTDVLLNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSCALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_707032.1 lipoprotein transporter ATP-binding subunit NC_008702.1.4606598. Protein 4e-36 48
lolD NP_707032.1 lipoprotein transporter ATP-binding subunit NC_012469.1.7686878. Protein 1e-40 45