Gene Information

Name : SF2980 (SF2980)
Accession : NP_708754.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3075782 - 3076207 bp
Length : 426 bp
Strand : -
Note : -

DNA sequence : 
ATGAACGGTATAAAAACGGGGCTGGGGATCACGCCGGGTGAGCACATTATCAGTGCCGACTCTGCGCTCAGCAGAAATAT
CCGGCAGTGTTTCTGCCTTTCCTGCCATGGCCGGTTGATTCTGCAGACAGATGCTCAGGGGGCGTGGTTTGAGCATGATT
TACATGCCCTGAGTGAGCAACAGAAGGCGGACTGTGTGGTGCTGAATCCGGAGAAGTCCCACCCTTACATTGAGGATATG
GCGATGTTTTTATCGCCATTACCGGTCGTGCTGGAGTGGCATTGTGTGATGTGTGAGCAGTTTTTTCATGGGAAGAAGTT
CTGTGAGGCCTGTGGTACGGGGATTTATTGCAGAGCGGTATGTACGAAGTCTGTTTACAGCTACCAGCCAGACTTGTTTG
AGGACTGCGGAGGTGCGAGTACTTAA

Protein sequence : 
MNGIKTGLGITPGEHIISADSALSRNIRQCFCLSCHGRLILQTDAQGAWFEHDLHALSEQQKADCVVLNPEKSHPYIEDM
AMFLSPLPVVLEWHCVMCEQFFHGKKFCEACGTGIYCRAVCTKSVYSYQPDLFEDCGGAST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3571 YP_003223432.1 hypothetical protein Not tested LEE Protein 3e-63 100
S3185 NP_838468.1 hypothetical protein Not tested SHI-1 Protein 3e-63 100
SF2980 NP_708754.1 hypothetical protein Not tested SHI-1 Protein 3e-63 100
unnamed CAE85180.1 hypothetical protein Not tested PAI V 536 Protein 4e-62 97
aec59 AAW51742.1 Aec59 Not tested AGI-3 Protein 4e-59 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SF2980 NP_708754.1 hypothetical protein VFG0644 Protein 8e-64 100