|
Name : clpA (LA_1879) Accession : NP_712060.1 Strain : Genome accession: NC_004342 Putative virulence/resistance : Virulence Product : ATP-dependent protease ClpA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1851603 - 1854185 bp Length : 2583 bp Strand : + Note : - DNA sequence : ATGAAATTAGATAAACTTACATCCAAATTAAACGAAGCGATTTATAACGCACAAGCGTCTGCCGAAAAATTGGGAAATCC GGAAATTAGTGAAGAACATATTTTAAAGGAAGTTCTATCACAGCCGGACGGACTTGTACCTCTTTTAATTTCTAAACTCA ATCTGAGTCCAAAATCATTTTTGGAAAGTACAGAAAATGCTTTGGGAAAACAACCGAAAGTAGGAGGAAATACGTCTGCA GATGTAGGCTTTTCGCGTTCGGCGGTTTCACTTTTAAAAGCCGCCGATGAAGTAAGAAAAGAATTAAAAGACGAGTATCT TTCTACGGACCATATCTTACTCGGGCTCATGAAAAACGGTACTGGGTCGTTAAAAACTGAGTTTTTAAAATTAGGATTAG AATATCATAAATTACTTAAAATCACTTTGGAAAATAGAAAGGGAAAAACAATCATGGACGACTCGCCGGAAGGAAAAACG GATGCACTTGCAAAGTATGCAAAAAACCTAAATGAACTTGCCAAACAAGGAAAATTAGATCCTGTCATAGGAAGAGACGA GGAAATTAGAAGGACAATACAAGTTTTATCTAGAAGAACAAAAAACAATCCTGTGCTTATTGGAGAACCAGGAGTTGGAA AAACTGCAATCGTGGAAGGGCTAGCTAACAAAATCGTTCAAGGAGAAGTGCCTGAAGGAATCAAAAATAAAACACTTTAT ACCTTGGACTTAGGTTCCATGATCGCCGGGGCTAAATATAGAGGGGAATTTGAAGACAGACTCAAAGCGTTGTTAGACGA GGTCAAATCTTCAGACGGAGAAGTGATTTTATTCATAGACGAAATTCATACTCTTGTAGGCGCTGGAGCCACAGAAGGAG CATTAGATGCTTCTAATATGTTAAAACCCATGCTTGCTAGAGGAGAACTACGTTGTATAGGTGCAACTACTCTAAAAGAA TATCAGAAATATATAGAGAAAGACGCGGCTTTAGAAAGAAGGTTTCAACCTGTTTATGTCAAGGAACCTTCCGTAGAGGA AACCGTAACGATTTTAAGAGGGCTTAAGGGGCGTTACGAATTACATCATGGAATTAGAATATTAGATTCTGCTTTGATTG CTGCCGCTACACTTTCTAATCGTTATATATCCGATCGATTTCTTCCAGATAAGGCGGTGGACTTGATCGATGAGGCCTCT TCCAAAATGAGGATTGAGATAGATTCTATGCCCGAGGAACTCGATCGTGCAAACAAAAGGATTCAATCTCTAAAGATAGA AAGAGAAGCTCTAAAAAAAGAACAGGATACGGCTTCGAAAGAAAGATTAAAAACTCTCGAAAGGGATTTATCCGAACAAG AGCAAAATTTTCAAACTTTAAAGGCGAGATGGGATTTAGAAAAATCTAAAATTGGTCGTTTGAAACAAATTAAAGAAGAA ATAGAAAAGTATAAAAATTTAGAAGCGGAAGCAGAAAGAAGAGGAGAGATTAATCGAGTGGCTGAGATTCGCTACGGAAA GTTAGTAGATCTTCAAAAAGAACTCGAATCCGCAAACGAAGAATTAAAAAAACAAGAAAGTGCTTCCAGACTTTTAAAAG AAGAAGTCTCCGAAGAGGATATAGCGAATATAGTTTCTCGTTGGACTGGGATTCCAGTTTCTAAAATGCTTCAAGGCGAA AGGGCAAAACTTCTTTTGATGGAGGATGTATTAAAAACCAAAGTGATCGGACAGGATCATGCTCTTAGACTCGTTTCGGA AGCGGTACAGAGATCTAGGGCCGGAATTGCAGATCCAAATCGTCCCATAGGAACGTTTTTATTTCTTGGACCTACTGGAG TAGGGAAGACCGAAACTGCAAAAGCACTCGCCGAATTCTTGTTTGACGATGTAAACGCGATGACCCGGATCGATATGAGT GAATACATGGAGGCTCATTCCGTAGCCAGGCTGATCGGTGCACCTCCGGGTTATGTAGGATACGATGAAGGAGGACAGCT TACGGAAGCGGTTCGAAGAAGACCATATTCTTTGATACTTTTTGACGAGATTGAAAAAGCAAATCCGGAAGTATTCAACA TTTTCCTTCAGATTTTAGATGAAGGAAGATTGACCGATGGAAAGGGACGTAACGTTGATTTTAAGAATACGGTGATCATT CTTACTTCGAATATAGGCTCCGAAGTTTTAGGATCTTCTGAATACACTTCGGAAGAAAAAGAAAGATTGGTGGAACAAAG ATTAAAAAAGCATTTTAAACCAGAATTTTTAAATCGAATTGACGAAGTAATTTTGTTTCATTCGATTACGGATTCCGTGA TTCATAAAATTGCGGATATTCAATTAGAAGGTTTGAGACAAAAGGCGAAAGAAAACGGGCTGGACGTAAGTTTTACAAAC GAGTTAAAAGATTATGTTTCTAAAGCCGGTTTTGACGCAGAATATGGAGCCAGACCTCTCAAACGTTTGATCCAAAGAGA AGTAGGAAATGCACTGAGTCGATATATATTAGACGGTAAGTTTACAAACGGGCAAAACGTAACCGTGGATTATAGACAGG GAAAGGTAGTTGTTGTAGTTTAA Protein sequence : MKLDKLTSKLNEAIYNAQASAEKLGNPEISEEHILKEVLSQPDGLVPLLISKLNLSPKSFLESTENALGKQPKVGGNTSA DVGFSRSAVSLLKAADEVRKELKDEYLSTDHILLGLMKNGTGSLKTEFLKLGLEYHKLLKITLENRKGKTIMDDSPEGKT DALAKYAKNLNELAKQGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLANKIVQGEVPEGIKNKTLY TLDLGSMIAGAKYRGEFEDRLKALLDEVKSSDGEVILFIDEIHTLVGAGATEGALDASNMLKPMLARGELRCIGATTLKE YQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKGRYELHHGIRILDSALIAAATLSNRYISDRFLPDKAVDLIDEAS SKMRIEIDSMPEELDRANKRIQSLKIEREALKKEQDTASKERLKTLERDLSEQEQNFQTLKARWDLEKSKIGRLKQIKEE IEKYKNLEAEAERRGEINRVAEIRYGKLVDLQKELESANEELKKQESASRLLKEEVSEEDIANIVSRWTGIPVSKMLQGE RAKLLLMEDVLKTKVIGQDHALRLVSEAVQRSRAGIADPNRPIGTFLFLGPTGVGKTETAKALAEFLFDDVNAMTRIDMS EYMEAHSVARLIGAPPGYVGYDEGGQLTEAVRRRPYSLILFDEIEKANPEVFNIFLQILDEGRLTDGKGRNVDFKNTVII LTSNIGSEVLGSSEYTSEEKERLVEQRLKKHFKPEFLNRIDEVILFHSITDSVIHKIADIQLEGLRQKAKENGLDVSFTN ELKDYVSKAGFDAEYGARPLKRLIQREVGNALSRYILDGKFTNGQNVTVDYRQGKVVVVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-103 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | NP_712060.1 | ATP-dependent protease ClpA | VFG0079 | Protein | 3e-158 | 44 |
| clpA | NP_712060.1 | ATP-dependent protease ClpA | VFG2084 | Protein | 5e-112 | 42 |
