Gene Information

Name : lolD (SO_2258)
Accession : NP_717854.2
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Resistance
Product : ABC-type lipoprotein release system ATPase component LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2373433 - 2374170 bp
Length : 738 bp
Strand : +
Note : -

DNA sequence : 
GTGGCACTTTGCCCATGTCATATAGAATCAATAGCGAGAATCTCAATGCAAGATGTGTTACTGCAAGTGCAGGCGGTGAG
TAAGAGTTATCACGATGGCGATGTAACCACGCAAGTGTTATCCGACGTCGATTTACAGGTATTTAAGGGTGAGCAGCTGG
CGATTGTGGGCACTTCAGGCTCCGGTAAAAGTACGTTACTGCACATTATGGGGACGCTTGATAAACCTTCATCGGGCAAA
GTGTTGTTGGCTGGTGAGGATTTATATCAGGTGAGCAGTGCGCGTCAGGCGCAGATCCGTAATCAGGATTTAGGCTTTAT
TTATCAATTTCATCATTTATTGCCCGAGTTCACCGCCCTTGAAAACGTGGCTATGCCGGCATTTATCCAAGGTCGTGATC
GCACATTGGCGCAGGCCGATGCCAAGGTTTTGCTCGAGAGAGTAGGGCTTGGGCACAGAATGAGCCATATTCCTGCTGAG
CTTTCAGGTGGTGAACGGCAACGGGTGGCAATCGCTCGTGCGCTGATCAACAAACCCAAGTTAGTGCTGGCCGATGAGCC
AACGGGAAACCTTGATGCTAAGAGCGGCGAGGCTGTGTATGAACTCATTCGCGAATTGGCCAATCAACTTGGTACGGCGT
TTGTGGTGGTCACCCACGATCCTAAATTAGCCGCGCGGATGGACAGACAACTCACCATGAAAAATGGTTATCTGCAAGTA
CCGGAAAGCGCCCAATGA

Protein sequence : 
MALCPCHIESIARISMQDVLLQVQAVSKSYHDGDVTTQVLSDVDLQVFKGEQLAIVGTSGSGKSTLLHIMGTLDKPSSGK
VLLAGEDLYQVSSARQAQIRNQDLGFIYQFHHLLPEFTALENVAMPAFIQGRDRTLAQADAKVLLERVGLGHRMSHIPAE
LSGGERQRVAIARALINKPKLVLADEPTGNLDAKSGEAVYELIRELANQLGTAFVVVTHDPKLAARMDRQLTMKNGYLQV
PESAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_717854.2 ABC-type lipoprotein release system ATPase component LolD NC_008702.1.4606598. Protein 9e-34 45
lolD NP_717854.2 ABC-type lipoprotein release system ATPase component LolD NC_012469.1.7686878. Protein 4e-40 43
lolD NP_717854.2 ABC-type lipoprotein release system ATPase component LolD CP001581.1.gene798.p Protein 1e-38 42