Gene Information

Name : rnhA (SO_2560)
Accession : NP_718146.1
Strain : Shewanella oneidensis MR-1
Genome accession: NC_004347
Putative virulence/resistance : Unknown
Product : ribonuclease HI RnhA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 2690179 - 2690655 bp
Length : 477 bp
Strand : +
Note : -

DNA sequence :
ATGACTGAACTAAAACTAATCCACATCTTCACCGATGGCTCTTGCTTAGGCAATCCTGGCCCCGGTGGCTATGGCATTGT
AATGAATTATAAGGGCCATACAAAGGAGATGTCCGATGGTTTTTCCCTGACGACCAATAATCGTATGGAATTATTAGCCC
CAATCGTTGCACTTGAGGCCCTAAAAGAACCTTGTAAAATCATCCTCACCAGCGATAGCCAATATATGCGCCAAGGGATC
ATGACTTGGATCCACGGCTGGAAGAAAAAAGGTTGGATGACCTCTAATCGTACACCAGTGAAAAATGTCGATCTTTGGAA
ACGTTTAGACAAAGCCGCCCAACTCCACCAAATTGATTGGCGCTGGGTAAAAGGCCATGCCGGACACGCTGAAAACGAAC
GTTGTGATCAACTTGCTCGCGCAGCGGCTGAAGCAAATCCGACGCAAATAGATACTGGCTATCAGGCGGAGTCTTAA

Protein sequence :
MTELKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYMRQGI
MTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAAAEANPTQIDTGYQAES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-49 66