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Name : secD (SO_3111) Accession : NP_718673.1 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3239495 - 3241345 bp Length : 1851 bp Strand : - Note : - DNA sequence : GTGTTAAATAAATACCCAATGTGGAAGAACATTATGGTGGTGCTTATCATCGCCATAGGTTGTTTCTATGCCGTACCTAA CCTGTTCGGTGAAGATCATGCGGTGCAAGTAGTGGCGACTCGAGGTGCTGAAGTCACAGCATCTACCCAAGCCAGAGTGA ACGAACTGTTAGCCAGTAAGGGCATTGCGGTAAAGCGCTCTGAGCTTGAAAAAGGTCAATTGTTGGTCCGTGTACAAAAC GCGGATCAACAATTACTTGCAAAAGAAGTGATTGCCGAAGCGTTAGGTGACAAATTTACCGTGGCACTTAACCTTGCTCC AGCAACCCCAAAGTGGCTCGAGTCTATGGGTGGTAGCCCAATGAAACTCGGCCTCGATCTTCGTGGTGGAGTACACTTCC TGATGGAAGTGGATATGGGCGAAGCCATTCGTAAGATGGAAGAGGCCAAAGTGGCCGATTTCCGCTCACAATTACGTGAA GAAAAAATCCGTTACGCTGGCATTCGCATTAATGCTCAAGGGATTGAAATCAAATTCCGTGATGCAGAAAGTTTAGCCAG TGCAGAACGTTTCTTAAAATCCCGCAGCAACGATATGGTGTTCTCCGATGTAAGCAAAGGCGAAGATTTCGCCCTGCAAG CCGTGATGAGCGAAACCTATCTTAAGCAGGTGAAAGAGGAAGCGTTGCAGCAAAACATTACCACAATCCGTAACCGTGTT AACGAGTTAGGGGTATCTGAGCCTGTGGTGCAACGTCAAGGTGCTGAGCGTATTATCGTCGAGCTGCCTGGGGTTCAAGA TACTGCTCGTGCGAAAGAAATTCTAGGTGCAACAGCATCGATTGAATTCCATATGGTCGATGACAAAGCTGACGCTAATG CGGCGCAAGCGGGTCGCGTTCCTGCTGGTTCTGAGGTGTATCAACGCCGTGAAGGTGGTCAAGTAGTGCTCAAGAAGGAA GTGATGCTAACGGGTGATCATATCACTGGCGCACAACCTAGTTTTGACCAATACAGCCGTCCTCAGGTGAGCATTAACCT CGATGCTAAAGGCGGTACCATTTTCTCTAACGTGACAAAGGACAATATCGGTAAACCGATGGCGACCTTGTTCATTGAAT ATAAAGACAGTGGTGAACGTAACGCTGATGGCAGCGTTAAGATGCTGAAAATCGAAGAGGTGATTTCAGTAGCGACCATT CAAGCGCGTTTAGGCCGTAACTTTGTTATCACAGGTTTAAGCCATGGTGAAGCACAGAACCTCGCATTATTGCTGCGTGC GGGTGCTTTGATCGCGCCAGTATCGATTGTAGAAGAACGTACTATTGGTCCAAGCCTCGGTGCGGAAAACATCGCAAGCG GTATCAATGCCATGCTCTGGAGTATGGGGGCGGTCGTGCTATTTATGCTGATTTACTACCGTGCCTTTGGCTTGATTGCC AATATCGCCTTGACCATGAACCTAGTGATGATCGTAGGCGTGATGTCAATGATCCCTGGTGCTGTTCTTACCTTACCGGG TATTGCCGGTATGGTATTAACCATTGGTATGGCAGTTGACGGCAACGTACTAATTTATGAGCGTATTCGAGATGAGATCC GCGCAGGACGTAGTGTGCAGCAGGCGATTCAAGAGGGGTATGCCAATGCCTTTTCATCCATTGCCGATTCGAACATCACC ACCTTTATCACCGCATTGATTCTCTTTGCCGTGGGTTCTGGCGCAGTAAAAGGTTTTGCTGTGACCCTGATGATAGGTAT TGCAACCTCGATGTTTACTGCAATCGTCGGAACCCGAGCCATAGTGAACGCGGTTTGGGGTGGTAAGCGCATTCAGACTC TGTCGATATAA Protein sequence : MLNKYPMWKNIMVVLIIAIGCFYAVPNLFGEDHAVQVVATRGAEVTASTQARVNELLASKGIAVKRSELEKGQLLVRVQN ADQQLLAKEVIAEALGDKFTVALNLAPATPKWLESMGGSPMKLGLDLRGGVHFLMEVDMGEAIRKMEEAKVADFRSQLRE EKIRYAGIRINAQGIEIKFRDAESLASAERFLKSRSNDMVFSDVSKGEDFALQAVMSETYLKQVKEEALQQNITTIRNRV NELGVSEPVVQRQGAERIIVELPGVQDTARAKEILGATASIEFHMVDDKADANAAQAGRVPAGSEVYQRREGGQVVLKKE VMLTGDHITGAQPSFDQYSRPQVSINLDAKGGTIFSNVTKDNIGKPMATLFIEYKDSGERNADGSVKMLKIEEVISVATI QARLGRNFVITGLSHGEAQNLALLLRAGALIAPVSIVEERTIGPSLGAENIASGINAMLWSMGAVVLFMLIYYRAFGLIA NIALTMNLVMIVGVMSMIPGAVLTLPGIAGMVLTIGMAVDGNVLIYERIRDEIRAGRSVQQAIQEGYANAFSSIADSNIT TFITALILFAVGSGAVKGFAVTLMIGIATSMFTAIVGTRAIVNAVWGGKRIQTLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-126 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-126 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-126 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-126 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 47 |
