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Name : sirE (SO_0478) Accession : NP_716114.2 Strain : Shewanella oneidensis MR-1 Genome accession: NC_004347 Putative virulence/resistance : Unknown Product : cytochrome c maturation system haem lyase subunit SirE Function : - COG functional category : - COG ID : - EC number : - Position : 500072 - 502138 bp Length : 2067 bp Strand : - Note : - DNA sequence : ATGATAAATATGATTCCAGAAATCGGGCACATATTGCTGATCATGAGTACTGTGTTTGCATTATTGTCGGCGGCCAGTCA TTTAATCGGTAGTTACCAGCGCAACCTTTATTTAATTGCATTTGGCAATAGATTATTTTACGCGTTATTTTTCACCTTAT TAACCGCGTTATGTAGCTTAGTTTTTAGCTTTATTGCCGATGACTTTTCAGTCGCCTATGTTGCCAATCATTCCAACAGC CAACTCGCCCTCGGTTATAAAGTCGCTGCGGTGTGGGGCAGCCATGAAGGCTCAATGCTGTTTTGGGTATTTGCCATTGC CCTATGGGGTGCAGTGATCAATTGGCGCCAAGCAACCCATAGCGCCAAACTCGATCTGGAAAACTTACAAGCAGATAAGG CTTACTTTGGTCGGGTACTCGCTATTTTGGCCTTAGTGATCCTCGGTTTTAATTTGTTTTTACTCTTTACTTCCAATCCC TTTGCTCGCTTGCTACCGAACATTCCAGTCGAAGGGCGCGACCTTAACCCCATATTGCAGGACATTGGCTTAATACTGCA TCCACCTATGCTGTTTTTGGGTTATGTCGGGCTAACGGTTTGCTTTGCCGCAGCGCTGGCATCACTGATTGGGGGCAAGT TACCTGCTCGCCACCTCGATTATTTACGTCCTTGGGTGCTACTGGCGTGGATTTTCCTCACAGGTGGTAATGCCTTTGGC TCTTGGTGGGCCTACAACGAACTGGGTTGGGGTGGTTGGTGGTTTTGGGACCCCGTTGAAAACGCCTCTTTTATTCCTTG GTTGGTTGCAACAGCGCTGGTGCATTCCTTAGTACTCACCCGAAAAACCCAGGGATTTACCCTCACCACCCTGTTTTTAT GTTTATTGGCCTTCTCCCTCAGTCTGTTAGGCAGCTTTTTAGTGCGTTCAGGCATAGTGCAATCGGTGCATGCCTTTGCC GCAGATCCAACCCGCGGTATGTCTATTCTCAGTTTGCTGGTGATTTTTGTTGGCGCTGCATTATTAATTTTTGCGCTCAA GGCCAATCTATTAAGGCGTGAAATCGACTTTGGTCTGTACAGTAAGGAAACGCTATTACTGCTCGGGATAGTGATTTTAG TGGTTGCCGCCTTTTCAGTGTTGCTTGGCACTTTTTACCCGCTGATTTATGAACTCCTCAACCTAGGTACACTTTCAGTC GGGGCGCCGTACTTCAACGCCATATTTGTACCATTGACCTTTTTAGTCGTACTACTGATGGGGATTGCCCCCCTCGTCGA ATGGCAAAATACCTCTAAGGCTCAAGCTATGCCGATATTGCTGTTCGGCTTTGGGGTATTGGCTATCGCCTTTTGGGTAA GTCTACAGGCGGCGTCTGGCAGCAACTTATTCTTACTGCTTGGCACGGCGGCAGCCTTATGGCTTATCGTGTGCTTATTA CTGACGCTGTTAGTGAGTCTTAGTGTTCGCAAACGCGCCAGTACAAACCAAATTACAGCCAACGCGCCCGTAAAATCCCG CACCTCAAAACAACGCTTTATCGGCATGATGCTCGCCCACCTCGGGGTTGCCATCACCATTATTGGTGCCTCAGCGGTAT CCAATTTTGAAGAAGAAGCACTGCTCAGAATGGGCCCAGGCCAAGGTAAGCCGTTAGCGGGTTATATCTTAGTGTATGAA AGCACTGAGAATGTCGAAACCAATAGCTTTACGGCAATCCAAGCCAATATCAGTATCCGCGATGGCGCGAATGATGAAGA GATCCTCGGTTATGTAAGGCCGCAACGACAAACTTTTAAAAGCAACGCGATGGAAATGTCCCACGCGGGGATCGACCACG GTTTTTGGCGGGATATTTATGTCTCAATGGGCGTGCAATTAAGTGACAGCGAATATCTGATCCGTATTAGCTATAAACCA CTGGCCACTTGGATTTGGCTGGGGGCACTTTTCATGATGCTCGGCGGCGCCATTGCCGCGTGGCCCGTAAGGCAAGCTCG CCGCGTCGAACAATCAGAACAGCTCAGTACAAGCTCATCATCTGCAAGGGAGACGGTAACCCAATGA Protein sequence : MINMIPEIGHILLIMSTVFALLSAASHLIGSYQRNLYLIAFGNRLFYALFFTLLTALCSLVFSFIADDFSVAYVANHSNS QLALGYKVAAVWGSHEGSMLFWVFAIALWGAVINWRQATHSAKLDLENLQADKAYFGRVLAILALVILGFNLFLLFTSNP FARLLPNIPVEGRDLNPILQDIGLILHPPMLFLGYVGLTVCFAAALASLIGGKLPARHLDYLRPWVLLAWIFLTGGNAFG SWWAYNELGWGGWWFWDPVENASFIPWLVATALVHSLVLTRKTQGFTLTTLFLCLLAFSLSLLGSFLVRSGIVQSVHAFA ADPTRGMSILSLLVIFVGAALLIFALKANLLRREIDFGLYSKETLLLLGIVILVVAAFSVLLGTFYPLIYELLNLGTLSV GAPYFNAIFVPLTFLVVLLMGIAPLVEWQNTSKAQAMPILLFGFGVLAIAFWVSLQAASGSNLFLLLGTAAALWLIVCLL LTLLVSLSVRKRASTNQITANAPVKSRTSKQRFIGMMLAHLGVAITIIGASAVSNFEEEALLRMGPGQGKPLAGYILVYE STENVETNSFTAIQANISIRDGANDEEILGYVRPQRQTFKSNAMEMSHAGIDHGFWRDIYVSMGVQLSDSEYLIRISYKP LATWIWLGALFMMLGGAIAAWPVRQARRVEQSEQLSTSSSSARETVTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 7e-97 | 42 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-87 | 41 |
