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Name : iroC (c1253) Accession : NP_753167.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1202758 - 1206495 bp Length : 3738 bp Strand : - Note : Residues 27 to 1231 of 1245 are 80.16 pct identical to residues 1 to 1209 of 1218 from GenPept.129 : >emb|CAD05883.1| (AL627276) ABC transporter protein [Salmonella enterica subsp. enterica serovar Typhi] DNA sequence : ATGCGGGACCGGAGTGTGCTGGCTTTTTTGCGGAACGATCCGGCCAGTGGATCGTATTTTACAGACGGAGGAGGCTTAAT GCCTGCGAATCACACTCCCACACCGGCTCAGTCATGGATAGTTCGCCTGGCGCGCGTGTGCTGGGAACGTAAGAAACTTA GTGTCATCGTGGTGGTAGCGTCAGTATCGACTATTTTGCTGGCTGCGCTGACGCCACTGCTGACAAGACAGGCTGTGAAT GACGCACTGGCGGGCAATCCGGCCCGCCTGCCGTGGCTGGCCTGCGGGTTACTGTTGATCGCTTTTTTTGATTTCATCGG TAACTATGTGCGCCGTGGTTATGCCGGGATGCTCTCACTCTGGGTGCAGCATACCCTCAGAGGACGGGTATTCGACAGTA TTCAAAAACTTGACGGCGCAGGCCAGGATGCGCTGCGCACCGGGCAGGTGATTTCACGGACCAACAGCGATCTGCAGCAG GTGCATACCCTGCTGCAGATGTGCCCGGTGCCGCTGGCAGTGTTCACTTATTACATTGCCGGCATTGCCGTGATGCTGTG GATGTCCCCTGCCATGACGCTTATCGTCGTGTGCGTACTGGTATGCTTGGCGATCACCGCGCTTCGTGCGCGTCGTAGGG TCTTCGCGCAAACCGGAATGGCCTCGGACCAACTGGCGAATCTCACCGAACATATACGCGAGGTGCTGGCACAGATCTCA GTGGTAAAATCCTGTGTGGCAGAGATGCGTGAAACGCACTGGCTCGATAGGCAGTCGCGGCAGATTGTGCGTGTACGCAT CGGTGCGGTTATCTCGCAGGCGATGCCAGGGGCCACTATGCTGGCGCTACCGGTGCTCGGGCAAATCGTCCTGCTGTGCT ACGGCGGGTGGTCGGTCATGCACGGGCGGATCGATCTCGGTACCTTCGTTGCATTCGCCAGCTTCCTCGCGATGCTGACC GGGCCAACCCGCGTACTGGCATCGTTTCTGGTTATCGCACAGCGCACTCAGGCGTCCGTGGAGCGGGTGTTTGCACTGAT CGACACCCGTTCACAGATGGAGGACGGGACGGAGTCGATTAACAGTCAGGTTGTCGGACTGGAACTGGAGAATATGAGCT TTGACTACCACCATGGCGACAGACATATCCTCAGCGATATCTCCTTTTCCCTGCGCGCTGGGGAAACCGTGGCGGTGGTG GGCGCATCGGGTTCAGGAAAATCGACCCTGTTGATGCTGCTGGCGCGTTTTTATGATCCCTGCTCCGGAAAGATATGGCT CAACACCAGCGAAGGCCGACAAAATCTTCGCGATATCAGACTGGAGGCGCTTCGTCGCCGGGTAGGCATCGTATTTGAAG ATGCTTTTCTGTTTGCCGGTACGGTGGCGGAAAATATCGCCTATGGCCACCCTCAGGCAACGGCGGACGACATTCGCCGT GCGGCAGCTGCTGCAGGAGCCAGCGATTTTATCAACGCCCTGCCGAAAGGCTTCGATAGCCTGTTAACCGAACGGGGTAC GAATCTTTCCGGCGGGCAGAGGCAGCGAATAGCGCTGGCGCGGGCGCTCATTACTGCACCGGACGTGTTAATCCTGGATG ATACCACCTCAGCGGTTGATGCTGTTACGGAAGCGGAGATTAATACCGCGCTGGGTCGCTATGCTGACGAAGGGCATATG CTGCTGGTGATTGCCCGACGGCGTTCAACGCTTCAGCTAGCCAGCCGGGTTGTGGTGCTGGATAAGGGCCGTATGGTGGA TACCGGAACCCCGGCAGAACTTGAAGCGCGCTGTCCGGCGTTCCGCGCACTGATGACCGGCGACAGCGATTTTCTGGCCA CGTCCCACAATAGCCACAACGAATTGTGGCCGGCTGAACCAGCGACACAAGACGATGTAACGGATACGGGGGATAAAGGT TTTGTCGCCCGTATGACCCGCGTACCGGAAAATGCAGTACAGCAGGCGCTGGCCGGTAAAGGTCGCAAAGTCACGTCACT ACTGAAGCCTGTGGCATGGATGTTCGTCATCGCCGCTCTGCTGATCGCACTCGATTCTGCAGCAGGCGTAGGGGTGCTGA TACTGTTGCAGCACGGCATTGACTCCGGTGTCGCCGCAGGCGATATGTCGACCATCGGCCTCTGTGCCCTGCTCGCCCTG TGCCTAGTCATTGTGGGCTGGTGCAGTTATTCTCTGCAGACGGTCTTCGCCGCCAGAGCGGCGGAATCAGTTCAGCATTC GGTGCGCTTGCGTAGCTTCGGCCATATGCTGCGTCTTGGACTCCCCTGGCACGAAAAGCATGCCGATTCGCGTCTGACCC GCATGACCGTTGATGTGGACTCTCTCGCCCGCTTTCTGCAAAACGGCCTTGCCGGTGCGGCCACCAGTCTGGTGACGATG TTCGCAATCGCCGCCACCATGTTCTGGCTCGACCCGATCCTGGCGCTGACGGCATTAAGCGCAGTGCCAGTGGCCGCACT GGCAACCATGATTTATCGCCGCCTCAGTACCCCTGCTTATGCACAAGCACGGCTGGAAATAGGCAAAGTCAACAGCACCC TGCAGGAAAAAGTCTCCGGCCTGCGTGTCGTGCAATCGCATGGTCAGCAGGAACTGGAGGGCGCCCGGCTGCGCGCGTTA TCGGAGCGTTTCCGCGCAACCCGTGTGCGAGCACAAAAATACCTTGCAGTCTATTTTCCGTTCCTGACATTCTGCACCGA GGCCTCCTATGCCGCCGTTCTGTTAGTGGGAGCTTCGCAGGTCGCCGCTGGAGAAATGACTGCCGGGGTACTGGCGGCTT TCTTCCTGTTGCTGGGGCAATTCTATGGGCCAGTGCAGCAGTTATCAGGGATTGTCGACGCCTGGCAGCAGGCGACAGCC AGCGGCAAACATATTGATGAACTACTGGCGACAGAAGGCACTGAGAACCTCGGGTCCTCTTCGGTCCTCCCTGTCACCGG TGCACTGCATCTTGATGAGGTCACGTTCAGTTATCCCGACAGTCACGAGCCAGCTCTGAACAAACTTACCCTGACGATCC CTGAGGGAATGGTTGTCGCGGTCGTCGGTCGCAGCGGTGCGGGTAAGTCGACGCTGATTAAGCTGATTGCCGGGTTGTAT TTCCCCACGCACGGCAACATCAGAATCGGTGTGCAAATGCTCGATGATGCCTCGCTCACTGAGTATCGTCGCCAGATTGG GCTTGTCGATCAGGATGTAGCACTGTTTAGTAGTGATATTGCAGAAAACATTCGTTATTCACGGCCATCCGCCACCAATG AAGACGTTGAAATTGCCTCACAGCGGGCAGGGCTGTATGAGATGGTGTGCAATCTGCCGCAGGGATTCCGGACACCGGTG AATAACGGCGGAGCCGATCTGTCCGCAGGTCAGCGCCAGTTGATTGCGCTGGCCCGCGCGCAACTGGCGAATGCTCACAT CCTGCTGCTCGACGAAGCCACGTCATGTCTGGATCGCACATCCGAAGAACGACTGATGTCATCGTTAACAGATGTCGTGC ATGCCGGGAAGCACTCGGCGCTGATTGTTGCACATCGTCTGACCACCGCGCAACGCTGCGATCTGATTGCCGTTATTGAT AAGGGGTTACTTGCGGAATACGGAACCCACGAACAGCTGTTATCTGCAGGCGGCCTCTATACCCGCTTATGGCATGACAG CGTCAGCAGTACTGCGCTCCATCGCCAGCACAACATGAAGGAGGAAACCCCGGGATAG Protein sequence : MRDRSVLAFLRNDPASGSYFTDGGGLMPANHTPTPAQSWIVRLARVCWERKKLSVIVVVASVSTILLAALTPLLTRQAVN DALAGNPARLPWLACGLLLIAFFDFIGNYVRRGYAGMLSLWVQHTLRGRVFDSIQKLDGAGQDALRTGQVISRTNSDLQQ VHTLLQMCPVPLAVFTYYIAGIAVMLWMSPAMTLIVVCVLVCLAITALRARRRVFAQTGMASDQLANLTEHIREVLAQIS VVKSCVAEMRETHWLDRQSRQIVRVRIGAVISQAMPGATMLALPVLGQIVLLCYGGWSVMHGRIDLGTFVAFASFLAMLT GPTRVLASFLVIAQRTQASVERVFALIDTRSQMEDGTESINSQVVGLELENMSFDYHHGDRHILSDISFSLRAGETVAVV GASGSGKSTLLMLLARFYDPCSGKIWLNTSEGRQNLRDIRLEALRRRVGIVFEDAFLFAGTVAENIAYGHPQATADDIRR AAAAAGASDFINALPKGFDSLLTERGTNLSGGQRQRIALARALITAPDVLILDDTTSAVDAVTEAEINTALGRYADEGHM LLVIARRRSTLQLASRVVVLDKGRMVDTGTPAELEARCPAFRALMTGDSDFLATSHNSHNELWPAEPATQDDVTDTGDKG FVARMTRVPENAVQQALAGKGRKVTSLLKPVAWMFVIAALLIALDSAAGVGVLILLQHGIDSGVAAGDMSTIGLCALLAL CLVIVGWCSYSLQTVFAARAAESVQHSVRLRSFGHMLRLGLPWHEKHADSRLTRMTVDVDSLARFLQNGLAGAATSLVTM FAIAATMFWLDPILALTALSAVPVAALATMIYRRLSTPAYAQARLEIGKVNSTLQEKVSGLRVVQSHGQQELEGARLRAL SERFRATRVRAQKYLAVYFPFLTFCTEASYAAVLLVGASQVAAGEMTAGVLAAFFLLLGQFYGPVQQLSGIVDAWQQATA SGKHIDELLATEGTENLGSSSVLPVTGALHLDEVTFSYPDSHEPALNKLTLTIPEGMVVAVVGRSGAGKSTLIKLIAGLY FPTHGNIRIGVQMLDDASLTEYRRQIGLVDQDVALFSSDIAENIRYSRPSATNEDVEIASQRAGLYEMVCNLPQGFRTPV NNGGADLSAGQRQLIALARAQLANAHILLLDEATSCLDRTSEERLMSSLTDVVHAGKHSALIVAHRLTTAQRCDLIAVID KGLLAEYGTHEQLLSAGGLYTRLWHDSVSSTALHRQHNMKEETPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iroC | NP_753167.1 | ABC transporter ATP-binding protein | VFG1653 | Protein | 0.0 | 99 |
