Gene Information

Name : ycfS (c1387)
Accession : NP_753297.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 1313640 - 1314773 bp
Length : 1134 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b1113; Escherichia coli O157:H7 ortholog: z1752

DNA sequence :
GTGAACTGGAAGAGAACGCGATCGCTTGATGGTAAATCGGGGGCGTCTCTGCGCCCCCATCTGCAATATTTACAAATTCT
TTGCACTTCCCTGCATTATCCGACACTGTCACCCTCCATAATTCAGACTTACTTTTTTATTACAATAACCTTATATTTAT
TATTGACTTTGGTGATGATCAAAACGCGTTTTTCTCGCTGGCTAACGTTTTTTACGTTCGCCGCTGCCGTGGCGCTGGCG
CTACCGGCAAAAGCCAACACCTGGCCGCTGCCGTCAGCGGACAGTCGTCTGGTTGGTGAAAACAAATTTCATGTGGTGGA
AAATGACGGTGGTTCTCTGGAAGCGATCGCCAAAAAATATAACGTCGGCTTTCTCGCTCTGTTACAGGCTAACCCCGGCG
TTGATCCTTACGTACCGCGCGCGGGTAGCGTGTTAACGATCCCGTTGCAAACCCTACTTCCAGACGCGCCGCGCGAAGGC
ATTGTGATCAACATTGCGGAGCTGCGTCTCTATTATTATCCGCCGGGAAAAAATTCGGTAACCGTATATCCCATCGGCAT
TGGTCAGTTAGGTGGTGACACGCTGACACCGACAATGGTGACCACTGTTTCTGACAAGCGTGCAAACCCAACCTGGACGC
CAACGGCAAACATTCGCGCGCGGTATAAGGCACAGGGAATTGAGTTGCCTGCGGTAGTTCCGGCTGGACCGGATAACCCA
ATGGGCCATCATGCGATTCGTCTGGCGGCCTATGGCGGCGTTTATTTGCTTCACGGTACGAACGCTGATTTCGGCATTGG
CATGCGGGTAAGTTCTGGCTGTATTCGTCTGCGGGATGACGATATCAAAACACTCTTTAGCCAGGTCACCCCAGGCACCA
AAGTGAATATCATCAACACCCCGATTAAAATCTCTGCCGAACCAAACGGTGCGCGTCTGGTTGAAGTACATCAGCCGCTG
TCAGAGAAGATTGATGACGATCCGCAGCTGCTGCCAATTACGCTGAATAGCGCAATGCAATCATTTAAAGATGCAGCACA
AACTGACGCTGAAGTGATGCAACATGTGATGGATGTCCGTTCCGGGATGCCGGTGGATGTCCGCCGTCATCAAGTGAGCC
CACAAACTCTGTAA

Protein sequence :
MNWKRTRSLDGKSGASLRPHLQYLQILCTSLHYPTLSPSIIQTYFFITITLYLLLTLVMIKTRFSRWLTFFTFAAAVALA
LPAKANTWPLPSADSRLVGENKFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREG
IVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNP
MGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKISAEPNGARLVEVHQPL
SEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-61 49