Gene Information

Name : c0307 (c0307)
Accession : NP_752251.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 283149 - 283940 bp
Length : 792 bp
Strand : -
Note : Residues 9 to 164 of 263 are 96.15 pct identical to residues 1 to 156 of 156 from GenPept.129 : >gb|AAK00470.1| (AF200692) unknown [Shigella flexneri 2a]

DNA sequence :
ATGACAACACGTATAACTTTCAATATGACCAGTGATGAGACGCTGCGAATTGTGGATGAGTACTGTCATACCCACAAACT
TTCGCGCTCTAAGGTAATCGACGCATTACTCAGCGCCACAGCACCTGTCCTTAACGATATTAACTGTTATTATCAACTTG
CAGGCAAACTGCAGTCACGCTTATTAAATGGAGTGTATCAACGGGATCTTCCTCACAAACGCAATGTCGTCAGTGCAGAG
AAGTATTGTCTGGAGATCTGGGAAAACAAACTTTTCACCAAAAGAATCCTGGAGTTTGACAGTTCAAATGGTGTTCTGTA
CGCGCTGAAACATAAAAGACACTATCGCCGGGATAAGATGATTGGACGGGTTGAAAGCCGGCGTATCAAAGACATTTGCG
AATACCAGATGCAACTGTCCGGGGAGAAGGCAAAATATGCCTGTTTTATTTATATTGAAAGAACAATATACAATCACGAT
AATCCATCCGGTGGGACACCTGTAAAAGCGGCTGTTGGTAATGCAGTCATCCTGCTGGCAAAAGACGTGATATATGACGA
GTACTTTTTTGATCTGCGGCAGTCATTTTTCGTGAGCGTTAAAGATCTGATGGCCTCTGGCGCAAAAGGTATTCCGGAGA
CACAGAAATATCCGGACGTTTATTGCTGGATCCCGCTTTTCTCCATAAATTCCGGCGTGGTCATTACCCCGGTCTATAAA
ATTGATCCCCGGAAACCCGTAACGGTAAAAAAACCGGATCAGATCACTGTTGTTTGTAATTACAGAGAATAA

Protein sequence :
MTTRITFNMTSDETLRIVDEYCHTHKLSRSKVIDALLSATAPVLNDINCYYQLAGKLQSRLLNGVYQRDLPHKRNVVSAE
KYCLEIWENKLFTKRILEFDSSNGVLYALKHKRHYRRDKMIGRVESRRIKDICEYQMQLSGEKAKYACFIYIERTIYNHD
NPSGGTPVKAAVGNAVILLAKDVIYDEYFFDLRQSFFVSVKDLMASGAKGIPETQKYPDVYCWIPLFSINSGVVITPVYK
IDPRKPVTVKKPDQITVVCNYRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85186.1 hypothetical protein Not tested PAI V 536 Protein 9e-117 96
SF2986 NP_708760.1 hypothetical protein Not tested SHI-1 Protein 1e-115 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c0307 NP_752251.1 hypothetical protein VFG0650 Protein 5e-116 94