Gene Information

Name : c0311 (c0311)
Accession : NP_752255.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 286738 - 287163 bp
Length : 426 bp
Strand : +
Note : Residues 15 to 119 of 141 are 36.36 pct identical to residues 44 to 153 of 173 from GenPept.129 : >gb|AAL08463.1|AF326777_38 (AF326777) unknown [Shigella flexneri 2a]

DNA sequence :
ATGAACGGTATAAAAACGGGGCTGGGGATCACGCCGGGTGAACACATAATCAGTGCTGATTCTGCACTCAGCAGAAATAT
CCGGCAGTGTTTCTGCCTTTCCTGTCATGGCCGGTTGATTTTGCAGACAGATGCTCAGGGGGCATGGTTTGAGCATGATT
TATATGCCCTGAGCGAGCAACAGAAGGCAGCCTGCGTGGTGCTGAATCCGGAAAAGTCCCACCCTTACATTGAGGATATG
GAGATGTTTTTATCGCCATTACCGGTCGTGCTGGAGTGGCATTGTATGATGTGTGAGCAGTTTTTTCATGGGAAGAAATT
CTGTGAGGCCTGTGGTACGGGGATTTATTGCAGAGCGGTATGTACGAAGTCTGTTTACAGCTACCAGCCAGACTTGTTTC
AGGACTGCGGAGGTGCGAGTACTTAA

Protein sequence :
MNGIKTGLGITPGEHIISADSALSRNIRQCFCLSCHGRLILQTDAQGAWFEHDLYALSEQQKAACVVLNPEKSHPYIEDM
EMFLSPLPVVLEWHCMMCEQFFHGKKFCEACGTGIYCRAVCTKSVYSYQPDLFQDCGGAST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2980 NP_708754.1 hypothetical protein Not tested SHI-1 Protein 1e-61 97
ECO103_3571 YP_003223432.1 hypothetical protein Not tested LEE Protein 1e-61 97
S3185 NP_838468.1 hypothetical protein Not tested SHI-1 Protein 1e-61 97
unnamed CAE85180.1 hypothetical protein Not tested PAI V 536 Protein 4e-61 96
aec59 AAW51742.1 Aec59 Not tested AGI-3 Protein 3e-58 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c0311 NP_752255.1 hypothetical protein VFG0644 Protein 4e-62 97