Gene Information

Name : c3562 (c3562)
Accession : NP_755437.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3411270 - 3411677 bp
Length : 408 bp
Strand : +
Note : Residues 1 to 135 of 135 are 83.70 pct identical to residues 1 to 135 of 461 from GenPept.129 : >gb|AAL08460.1|AF326777_35 (AF326777) unknown [Shigella flexneri 2a]

DNA sequence : 
ATGAGCAGCTCACTTCCTGACGATATCAATGCACTGAAACGTCTCCTTGCCGAACAGGAGGCGCTGAACCGTGCCCTGCT
GGAAAAGCTGAACGAGCGTGAACGCGAAATAGACCATCTGCAGGCACAGCTGGATAAGCTGCGCCGGATGAACGTCGGCA
GCTGCTCCGAAAAAGTCTCCCGTCGTATCGCACAGATGGAAGCTGACCTGAAGGCACTTCAGAAAGAAAGTGATACCCTT
ACCGGTCGGGTTGACGACCCGGCCGTGCAGCGCCCGCTGCGTCAAACCCGCACCCGCAAACCGTTCCCCGAATCACTCCC
CCGCGATGAAAAACGGCTGCTGCCGGCAGCGTCATGCTGCCCGGAATGTGGAGGCTCGCTGAGCTATCTGGGTGAGGATG
CCGCCTAA

Protein sequence : 
MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQLDKLRRMNVGSCSEKVSRRIAQMEADLKALQKESDTL
TGRVDDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAASCCPECGGSLSYLGEDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3562 NP_755437.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-56 100
c3580 NP_755455.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-32 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c3562 NP_755437.1 hypothetical protein VFG1699 Protein 5e-57 100