Gene Information

Name : hlyB (c3573)
Accession : NP_755448.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hemolysin B
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 3422041 - 3424164 bp
Length : 2124 bp
Strand : +
Note : Residues 1 to 707 of 707 are 99.57 pct identical to residues 1 to 707 of 707 from SwissProt.40 : >sp|P10089|HLY2_ECOLI Hemolysin secretion ATP-binding protein, chromosomal

DNA sequence :
ATGGATTCTTGTCATAAAATTGATTATGGGTTATACGCCCTGGAGATTTTAGCCCAATACCATAACGTCTCTGTTAACCC
GGAAGAAATTAAACATAGATTTGACACAGACGGGACTGGTCTGGGATTAACGTCATGGTTGCTTGCTGCGAAATCTTTAG
AACTAAAGGTAAAACAGGTAAAAAAAACAATTGACCGATTAAACTTTATTTCTTTGCCCGCATTAGTCTGGAGAGAGGAT
GGACGTCATTTTATTCTGACTAAAGTCAGTAAAGAAGCAAACAGATATCTTATTTTTGATCTGGAGCAACGAAATCCCCG
TGTTCTCGAACAGTCTGAGTTTGAGGCGTTATATCAGGGGCATATTATTCTTATTGCTTCCCGTTCTTCTGTTACCGGGA
AACTGGCAAAATTTGACTTTACCTGGTTTATCCCTGCCATTATAAAATACAGAAAAATATTTATTGAAACCCTTGTTGTA
TCTGTTTTTTTACAATTATTTGCATTAATAACCCCCCTTTTTTTTCAGGTGGTTATGGACAAAGTATTAGTACACAGGGG
GTTTTCAACCCTTAATGTTATTACTGTCGCATTATCTGTTGTGGTGGTGTTTGAGATTATACTCAGCGGTTTAAGAACTT
ACATTTTTGCACATAGTACAAGTCGGATTGATGTTGAGTTGGGTGCCAAACTCTTCCGGCATTTACTGGCGCTACCGATC
TCTTATTTTGAGAGTCGTCGTGTTGGTGATACTGTTGCCAGGGTAAGAGAATTAGACCAGATCCGTAATTTTCTGACAGG
ACAGGCATTAACATCTGTTCTGGACTTATTATTTTCATTCATATTTTTTGCGGTAATGTGGTATTACAGCCCAAAGCTTA
CTCTGGTGATCTTATTTTCGCTGCCCTGTTATGCTGCATGGTCTGTTTTTATTAGCCCCATTTTGCGACGTCGCCTTGAT
GATAAGTTTTCACGGAATGCGGATAATCAATCTTTCCTGGTGGAATCAGTCACGGCGATTAACACTATAAAAGCTATGGC
AGTCTCACCTCAGATGACGAACATATGGGACAAACAATTGGCAGGATATGTTGCTGCAGGCTTTAAAGTGACAGTATTAG
CCACCATTGGTCAACAAGGAATACAGTTAATACAAAAGACTGTTATGATCATCAACCTGTGGTTGGGAGCACACCTGGTT
ATTTCCGGGGATTTAAGTATTGGTCAGTTAATTGCTTTTAATATGCTTGCTGGTCAGATTGTTGCACCGGTTATTCGCCT
TGCACAAATCTGGCAGGATTTCCAGCAGGTTGGTATATCAGTTACCCGCCTTGGTGATGTGCTTAACTCTCCAACTGAAA
GTTATCATGGGAAACTGGCATTACCGGAAATTAATGGTAATATCACTTTTCGTAATATCCGGTTTCGCTATAAGCCTGAC
TCTCCGGTTATTTTAGATAATATCAATCTCAGTATTAAGCAGGGGGAGGTTATTGGTATTGTCGGACGTTCTGGTTCAGG
AAAAAGCACATTAACTAAATTAATTCAACGTTTTTATATTCCTGAAAATGGCCAGGTCTTAATTGATGGACATGATCTTG
CGTTGGCCGATCCTAACTGGTTACGTCGTCAGGTGGGGGTTGTGTTGCAGGACAATGTGCTGCTTAATCGCAGTATTATT
GATAATATCTCACTGGCTAATCCTGGTATGTCCGTCGAAAAAGTTATTTATGCAGCGAAATTAGCAGGCGCTCATGATTT
TATTTCTGAATTGCGTGAGGGGTATAACACCATTGTCGGGGAACAGGGGGCAGGATTATCCGGAGGTCAACGTCAACGCA
TCGCAATTGCAAGGGCGCTGGTGAACAACCCTAAAATACTTATTTTTGATGAAGCAACCAGTGCTCTGGATTATGAGTCG
GAGCATATCATCATGCGCAATATGCACAAAATATGTAAGGGCAGAACGGTTATAATCATTGCTCATCGTCTGTCTACAGT
AAAAAATGCAGACCGCATTATTGTCATGGAAAAAGGGAAAATTGTTGAACAGGGTAAACATAAGGAACTGCTTTCTGAAC
CGGAAAGTTTATACAGTTACTTATATCAGTTACAGTCAGACTAA

Protein sequence :
MDSCHKIDYGLYALEILAQYHNVSVNPEEIKHRFDTDGTGLGLTSWLLAAKSLELKVKQVKKTIDRLNFISLPALVWRED
GRHFILTKVSKEANRYLIFDLEQRNPRVLEQSEFEALYQGHIILIASRSSVTGKLAKFDFTWFIPAIIKYRKIFIETLVV
SVFLQLFALITPLFFQVVMDKVLVHRGFSTLNVITVALSVVVVFEIILSGLRTYIFAHSTSRIDVELGAKLFRHLLALPI
SYFESRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILFSLPCYAAWSVFISPILRRRLD
DKFSRNADNQSFLVESVTAINTIKAMAVSPQMTNIWDKQLAGYVAAGFKVTVLATIGQQGIQLIQKTVMIINLWLGAHLV
ISGDLSIGQLIAFNMLAGQIVAPVIRLAQIWQDFQQVGISVTRLGDVLNSPTESYHGKLALPEINGNITFRNIRFRYKPD
SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSII
DNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYES
EHIIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 100
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 99
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B VFG0907 Protein 0.0 100
hlyB NP_755448.1 hemolysin B VFG1557 Protein 0.0 99
hlyB NP_755448.1 hemolysin B VFG1501 Protein 0.0 99
hlyB NP_755448.1 hemolysin B VFG0841 Protein 0.0 73
hlyB NP_755448.1 hemolysin B VFG1269 Protein 0.0 54