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Name : clpV (VV2_0430) Accession : NP_762394.1 Strain : Genome accession: NC_004460 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 463135 - 465699 bp Length : 2565 bp Strand : - Note : COG0542 DNA sequence : ATGGCATCTCTTTCACTATCCGCGTTAGTTGACAAGTTAACCCCTGAAGCGAAAAGAGCATTAGAGCAAGCCGCTGCTTT GGCGAGCTCAAGAACTCACCACAGCATTGAAATGACACATTGGCTGCTTACGCTAGTGCAAAGTGCTGGGCCTGAAGAAA TCGAACTGTATCGCTCGTTTAAGGTTGATCTGAACCAATTGCAGACGGATCTCACTTTGCAATTAGAGAAGTACAAAACG GGCTGTCAAACTGTACCGGGGTTGTCATCCCATACGGTCACCATACTACAGAATGCATGGATGACAGCGACGATTGCGTT TGAAGCAGAAAAAATTGCTGCTGTTCATTTGCTTCATGCCTTCCTCTCTGACGACACGTTGTTTGCTCTATCTTCGACTG TGAGCAAAGAGCTAAGCAAAATTCAGCCTAGTGCGCTAATCGAATACGCACAGACTCATGTTGAAATGGCTAATCAAATT CCCAACCACAGAGCTTCTACACAAGCGTTGGATCAATTTACGATAGATCTGACAGAGCAAGCGGAGTTGGGGCAAATTGA TCCGGTGATTGGCAGAGATGATGAAATTCGTCTGATGACGGATATTCTTCTGCGACGCCGTCAAAATAACCCTATCCTGA CGGGTGAGGCGGGGGTAGGTAAAACCGCCGTTGTCGAAGGACTTGCGCTAAAAATCGCTGAAGGGGATGTGCCTCCCGCG CTTAAAGCAGTGAGAATTAAATCGCTTGATTTGGCGCTACTCCAGGCCGGTGCTGGTATGAAGGGCGAGTTTGAAAATCG ATTGAAGAACGTGGTCAAAGAAGTCAAAGAGTCAGCGGTGCCTATCGTACTGTTTATCGATGAAGCGCATGGATTGATTG GTGGAGGGGCGCAGGCTGGTCAAGGTGATGCTGCGAACATACTTAAGCCCGCCTTAGCCAGGGGGGAGCTACGCACGATC GCCGCAACCACATGGGCTGAATACAAAAAATATGTAGAGAAAGACGCAGCTCTGACCCGTCGTTTTCAAGTGGTTAAAAT AGAGGAACCTTCACCTGAATTGGCGATAGAGATGCTGCGTGGCCTCGTTCCTGTCATGGAAAAACATCATGGCGTCCACA TTACTACCGAGGCACTCAAGGCTGCCGTCTTTCTTTCTTCTCGCTACATTAGCGGCCGTCAGTTGCCAGACAAGGCGGTA TCGGTTTTAGATACCGCGTGCTCTCGTGTTGCTTTGAGTCAAAACTCGATACCAGGGCTGCTTGATCAGAAATACAAAAA ACGCCAAATGATAGAAGCTCAACAGCTTCAGCTCACCAATGAACTTGCATTTGGTCATTCTCATCAAACAGCTCTTGACG AACTTGAGAGCAAGTTGTCGCTCCTTCAAAATGAAATTCACCAACTAGAGACAACGTGGCGAGATGAAGAAGGCGCAGTC AAGCAGGCCAAAGCGCTCCGTGATTCCATTTTGGCAGAACCATCTGCAGAGAAAGCCAATCAGCTGCAATCCATTGAACA GCAGTTATCGTCTAACCCGATGCCTTTGGTGTTTTCGCATGTTAACGAAGCCCTAATTGCTGAAATTATTGCAGGCTGGA CAGGCATACCATTAGGCAAACTAAAAAGCGATGAAATAAAAGCGATTCTAGACTTACAGCAACATCTGCAAGAGCGAGTG GTCGGCCAAGATCACGCGTTGAGTAAAATGGCGGAAGTGATCAAAACCGCGAGAGCACAACTCAATGAAGAATCAAAACC TAACGGTATCTTTTTCTTGGTAGGCCCAAGTGGTGTCGGTAAAACGGAATCTGCGTTGGCCATTGCTGAGCAAGTGTATG GTAGTGAAGAAAACATCACCGTCATTAACATGTCTGAATTTAAAGAAGAGCATAAAGTCTCGTTACTGCTGGGCTCTCCT CCGGGCTACGTTGGGTATGGCGAAGGTGGTGTGCTAACGGAAGCCGTAAGAAGAAAACCTTACAGCGTCATATTGCTTGA TGAAATGGAGAAAGCCCATCCGGGTGTACAGGATATTTTCTATCAAGTGTTTGATAAGGGCATGATTAAAGACGGTGAAG GGCGAGACATCGATTTCAAAAACACCATCATTATCATGACTTCCAACTCTGGGACGGAAACAACAATGGAGTTATTCCAA GATCCAGAGCTTGCTCCGGATCCGGAGGCACTCAAAGAAGCGCTACGAGATGATTTATTACAGGATTTCAAGCCCGCTTT TTTAGGTCGAGTGAATGTCATTCCTTATATCCCTTTGCACCGTGATGTATTGGAGAAAATCACCGCGCTGAAACTCTCCA AAATTCAGAAGAGGATAAAAACAAACTATAAAGCAGAAGCGGTGATCAACGATCGCTTAATTAATAGTATTGTTGACAGC TGCAATGAAACGGGCAGTGGCGCGCGTGCTCTTCAAAATGTGATTGAAAATAAGGTGCTGCCTAAAATATCTGAATCCGT ATTAAATGCCATTCTTAATGATATAAGAATAAATAAAATTGAGATAGAAGGTGAAGTTGATGACTTGTCTATCTCAATCG TCTAA Protein sequence : MASLSLSALVDKLTPEAKRALEQAAALASSRTHHSIEMTHWLLTLVQSAGPEEIELYRSFKVDLNQLQTDLTLQLEKYKT GCQTVPGLSSHTVTILQNAWMTATIAFEAEKIAAVHLLHAFLSDDTLFALSSTVSKELSKIQPSALIEYAQTHVEMANQI PNHRASTQALDQFTIDLTEQAELGQIDPVIGRDDEIRLMTDILLRRRQNNPILTGEAGVGKTAVVEGLALKIAEGDVPPA LKAVRIKSLDLALLQAGAGMKGEFENRLKNVVKEVKESAVPIVLFIDEAHGLIGGGAQAGQGDAANILKPALARGELRTI AATTWAEYKKYVEKDAALTRRFQVVKIEEPSPELAIEMLRGLVPVMEKHHGVHITTEALKAAVFLSSRYISGRQLPDKAV SVLDTACSRVALSQNSIPGLLDQKYKKRQMIEAQQLQLTNELAFGHSHQTALDELESKLSLLQNEIHQLETTWRDEEGAV KQAKALRDSILAEPSAEKANQLQSIEQQLSSNPMPLVFSHVNEALIAEIIAGWTGIPLGKLKSDEIKAILDLQQHLQERV VGQDHALSKMAEVIKTARAQLNEESKPNGIFFLVGPSGVGKTESALAIAEQVYGSEENITVINMSEFKEEHKVSLLLGSP PGYVGYGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGMIKDGEGRDIDFKNTIIIMTSNSGTETTMELFQ DPELAPDPEALKEALRDDLLQDFKPAFLGRVNVIPYIPLHRDVLEKITALKLSKIQKRIKTNYKAEAVINDRLINSIVDS CNETGSGARALQNVIENKVLPKISESVLNAILNDIRINKIEIEGEVDDLSISIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-153 | 46 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-125 | 44 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-125 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | NP_762394.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 5e-165 | 46 |
| clpV | NP_762394.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 1e-144 | 45 |
| clpV | NP_762394.1 | type VI secretion ATPase, ClpV1 family | VFG0079 | Protein | 2e-99 | 41 |
