Gene Information

Name : SE1939 (SE1939)
Accession : NP_765494.1
Strain : Staphylococcus epidermidis ATCC 12228
Genome accession: NC_004461
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1971594 - 1972262 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGGGTCTAGTTGTTAAAGATATAAGTAAAACATTTGGTGAAAAAAGCTCAAAAACAGAGGTGTTAAAAGATATTAATTT
TGAAGTGAAAGATGGAGAATTCATCATTTTAAATGGCGCTTCAGGTTCAGGAAAAACAACCTTATTAACTATTTTAGGTG
GTTTGTTATCTCAAACATCAGGTGATGTAGTATACGAGGGGAAATCCTTATTTGAACGACATACTAATAAAGCGCACTTA
AGACTAAATGATATTGGTTTTATCTTTCAAGCCTCTCATTTAGTTCCATACTTAAAAGTTTTAGACCAACTTACCTTAAT
AGGTAAAGAAGCTGGAATGTCTAGCAAAGAAGCTCAAGCAAGAGCTAAAGAATTATTAACAAAAATTGGATTAGAAGAAC
AACTTAATAGCTACCCACATATGCTTTCAGGTGGACAACAACAACGTGTAGCGATTATGAGAGCACTTATGAATCATCCG
AAAATTGTTTTAGCAGATGAACCCACAGCAAGTCTTGATGCTAGTCGTGCTCAAGAGGTTGTTGAAATGATCAGAAAACA
AATAAAAGCTAACCAAATGATAGGTATCATGATTACTCATGATGAAAGCTTGTTCAAATACGCTGATCGTATTGTTCAAT
TGTACGATGGTAAAATAAAAAACAGTTAA

Protein sequence : 
MGLVVKDISKTFGEKSSKTEVLKDINFEVKDGEFIILNGASGSGKTTLLTILGGLLSQTSGDVVYEGKSLFERHTNKAHL
RLNDIGFIFQASHLVPYLKVLDQLTLIGKEAGMSSKEAQARAKELLTKIGLEEQLNSYPHMLSGGQQQRVAIMRALMNHP
KIVLADEPTASLDASRAQEVVEMIRKQIKANQMIGIMITHDESLFKYADRIVQLYDGKIKNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE1939 NP_765494.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-24 43