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Name : ECA1274 (ECA1274) Accession : YP_049380.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 1448117 - 1448638 bp Length : 522 bp Strand : - Note : Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGTACACAGAGGCTGTTAAAAAACCCGACTTACTGTCGCTGATATTTCGCAGCGATTATCGCTGGCTAACAGACAAATT ACGCCGCCGTATTGCCTACGGCTGTGAAGCGGAAGATGTCGCCTCAGAGGCATTTTTACGTTTGGCCTCGCTACCAAATC TTGCCAATGTACAGGAACCGCGCGCGATGCTAACCACGCTCGCCAAGCGCGTACTGTATGAAAACTGGCGTCGCCGCGAT CTGGAAAAAGCCTATCTCACTGCACTGGCGAGTAAACCTGAATTTCACCATCCGTCGCCGGAAGAGCAACAGCTGTTGAT GGAGGCGCTGCTCACTATCGATCAGGCGCTGGATGGGTTATCCACCAAAGCACGGCAGGCATTTCTGTTCAGCCAGCTTG ATGGCATGACCTATGCCGACATTGCCGTACAGCTCGATGTCTCCGCCAGTATGGTGAGAAAATATATCGCCAAAGCGCTG ACCAACTGCTATCTGGCCACGCAGGACAGCAGTGATTTATAG Protein sequence : MYTEAVKKPDLLSLIFRSDYRWLTDKLRRRIAYGCEAEDVASEAFLRLASLPNLANVQEPRAMLTTLAKRVLYENWRRRD LEKAYLTALASKPEFHHPSPEEQQLLMEALLTIDQALDGLSTKARQAFLFSQLDGMTYADIAVQLDVSASMVRKYIAKAL TNCYLATQDSSDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 6e-29 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECA1274 | YP_049380.1 | RNA polymerase sigma factor | VFG1049 | Protein | 2e-29 | 46 |
