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Name : ccmF (ECA1887) Accession : YP_049984.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : cytochrome C-type biogenesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2141385 - 2143340 bp Length : 1956 bp Strand : + Note : Similar to Escherichia coli cytochrome C-type biogenesis protein CcmF or b2196 SWALL:CCMF_ECOLI (SWALL:P33927) (647 aa) fasta scores: E(): 1.2e-198, 74% id in 650 aa DNA sequence : ATGATGCCTGAAGTGGGCAATTATCTGCTCTGTCTGGCGCTGGGCGTTGCACTGCTGCTCAGCGTGTATCCGCTGTGGGG AGCATCGCGTCAGGATGAACGCCTAATGGCGCTGGCGCGTCCACTTGCCTGGGCGCTGTTTGCATGCATTTTGGCTTCCT TCCTCGTGTTGGTACACGCGCTGGTGATCAATGATTTCACCGTCCTCTATGTAGCAAATAACTCGAACCGTGCGCTGCCA GTCTGGTATCGCGTGGCGGCGGCGTGGGGCGCACATGAAGGATCGCTGCTGCTCTGGGTTCTGCTGATGAGCGGTTGGAC CTTCGCCGTGGCGGTCTTCAGCCGAGGGATGTCGCTGGATGCAGTAGCCCGGGTATTAGCCGTCATGGGAATGATTAATG TCGGCTTCTTATTGTTCATTATTCTGACGTCGAATCCCTTTACGCGCACGCTGCCGGACTACCCAATTGACGGGCGCGAT CTCAATCCGCTGCTGCAGGATGTCGGGTTAATCTTCCACCCTCCGCTGCTTTACATGGGTTATGTCGGTTTTTCCGTGGC GTTTGCGTTTGCGGTTGCCTCGCTGCTGGCTGAACGGCTGGACAGCGCGTGGGCACGTTGGTCTCGACCGTGGACGCAGG CGGCCTGGTCGTTCCTGACGTTGGGTATCGTGCTCGGCTCTGGTTGGGCGTATTACGAACTCGGCTGGGGCGGTTGGTGG TTCTGGGATCCGGTAGAAAATGCCTCACTGATGCCGTGGCTGGTGGGCACGGCGCTGCTGCATTCGCTGTCGGTCACCGA AAAACGCGGCAGCTTTAAAGCCTGGACGGTGTTGTTGGCTATCGGCGCGTTCTCGCTCTGCCTGTTGGGTACCTTTCTGG TGCGTTCTGGCGTACTGGTGTCGGTGCATGCATTTGCCTCCGATCCGGCGCGTGGGATGTTTATTCTCGCATTTCTGGTC ATTGTCATCGGCGGTTCATTGCTGCTGTTCGCCATCAAAGGCAACAGAGTACGGGCACGGGTGACGAATTCGCTCTGGTC GCGTGAGACGTTCCTGCTCGGCAATAACCTGATCCTGATGGCTGCCACGCTCGTGGTGCTGCTGGGAACGCTGCTGCCGT TGGTGCATAAGCAATTGGGTTTGGGCAGCATTTCCATTGGCGCACCGTTCTTCAACACCATGTTTACCCTGTTAATGTCG CCTTTTGCTCTGCTGTTGGGCGTGGGGCCACTGGTTCGTTGGCGGCGCGATGAGCCGCAAAAGCTGCGTAAGCTGCTGCT GGTTGCGCTGGCTGTGACCGCCGCGCTGTCGCTGCTGCTTCCGTGGTTGTTGCAGGACTCGCTGGTTGCCATGACGGTAG TCGGCTTGTCGATGGCGCTGTGGGTATTTTTCTTAACGGTGTACGACCTGCATGCCAATTCTACTCGACGTCATGGCCTG CTGCGCGGTTTGACCACACTCTCACTGAGCCAGTGGGGCATGGTGTGCGGTCATATTGGGCTGGCGGTGACGGTGGTGGG CATCGCCTTCAGTCAGAATTATAGCGTCGAGCGTGATGTGCGGATGCGGGCAGGCGACAGCATCCAGATCCATGATTATC GGTTTACGTTTCAAGGTGTGCAGAATGTTGTGGGGCCTAACTGGCACAGCGGTAAAGGGACGATTGAGGTCACGCGTAAC GGCAAGCCGGAGGCGATCCTGAAAGCGGAAAAACGCTTCTATAACACCAGCGGCGCGGTCATGACGGAAGCTGCTATTGA TGCGGGTGTGACGCGCGATCTCTATGCGGCCTTGGGCGAACAATTAGATGACGATAGCTGGGCGGTACGGCTGTATTACA AACCCTTTATTCGCTGGATTTGGTATGGCGGGGGGCTGATGGCGTTAGGTGGCATTCTGTGCATGTTTGACCCTCGCTAT CGCCTGCGTCGGGCCGTTAGGGAGACATCAGCATGA Protein sequence : MMPEVGNYLLCLALGVALLLSVYPLWGASRQDERLMALARPLAWALFACILASFLVLVHALVINDFTVLYVANNSNRALP VWYRVAAAWGAHEGSLLLWVLLMSGWTFAVAVFSRGMSLDAVARVLAVMGMINVGFLLFIILTSNPFTRTLPDYPIDGRD LNPLLQDVGLIFHPPLLYMGYVGFSVAFAFAVASLLAERLDSAWARWSRPWTQAAWSFLTLGIVLGSGWAYYELGWGGWW FWDPVENASLMPWLVGTALLHSLSVTEKRGSFKAWTVLLAIGAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFLV IVIGGSLLLFAIKGNRVRARVTNSLWSRETFLLGNNLILMAATLVVLLGTLLPLVHKQLGLGSISIGAPFFNTMFTLLMS PFALLLGVGPLVRWRRDEPQKLRKLLLVALAVTAALSLLLPWLLQDSLVAMTVVGLSMALWVFFLTVYDLHANSTRRHGL LRGLTTLSLSQWGMVCGHIGLAVTVVGIAFSQNYSVERDVRMRAGDSIQIHDYRFTFQGVQNVVGPNWHSGKGTIEVTRN GKPEAILKAEKRFYNTSGAVMTEAAIDAGVTRDLYAALGEQLDDDSWAVRLYYKPFIRWIWYGGGLMALGGILCMFDPRY RLRRAVRETSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 73 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-123 | 52 |
