|
Name : dspF (ECA2114) Accession : YP_050209.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Virulence Product : avirulence protein Function : - COG functional category : - COG ID : - EC number : - Position : 2405023 - 2405445 bp Length : 423 bp Strand : + Note : Similar to Erwinia amylovora DspF or DspB SWALL:O54621 (EMBL:U97504) (139 aa) fasta scores: E(): 1.8e-19, 42.85% id in 133 aa, and to Pseudomonas syringae avirulence protein AvrF SWALL:O66102 (EMBL:U97505) (129 aa) fasta scores: E(): 1.1e-13, 36.64% id in DNA sequence : ATGACACCGACACAACAACATATTGCCCGCTTATTACGCCATTATGGTGCGCTCAACCGGACTCAACTGGGCTTGCAGAA CGGGATCTGCGCACTGCGCGAGCCAGACGGGAAGGAAGCGGTGGTTTTGGAAGTCCCCGCGAGCGGCAGCGCGTTGGTAT TGCATAGTGACGTGATGCGGTTTCAGGGAGACGTCGGCACCGAGGTGTATCAACTGATGCTGATGCTTAATTTTGAGATG GCGGCGATGAAAGGCTGTTGGCTGGCGTTGGATGAGAATTCGACGCTGCGTTTGTGCACTCAGCACACCGCAGAATCGTT AGATGAACCAAGTTTTACGGCGCTGCTGCCCGCGTTTATCAGCCAGGTAAAAGAGACCCGACTTCTGATTCGCGGGCTAT TGCCACGGCTCATGGCAGCTTAA Protein sequence : MTPTQQHIARLLRHYGALNRTQLGLQNGICALREPDGKEAVVLEVPASGSALVLHSDVMRFQGDVGTEVYQLMLMLNFEM AAMKGCWLALDENSTLRLCTQHTAESLDEPSFTALLPAFISQVKETRLLIRGLLPRLMAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dspF | AAC04851.1 | DspF | Virulence | Hrp PAI | Protein | 5e-27 | 43 |
