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Name : ECA2391 (ECA2391) Accession : YP_050486.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : cold shock-like protein CspC Function : - COG functional category : K : Transcription COG ID : COG1278 EC number : - Position : 2702738 - 2702947 bp Length : 210 bp Strand : - Note : Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi cold shock-like protein CspC SWALL:CSPC_ECOLI (SWALL:P36996) (68 aa) fasta scores: E(): 3.2e-25, 97.05% id in 68 aa, and to Yersinia p DNA sequence : ATGGCAAAGATTAAAGGTCAGGTTAAGTGGTTCAACGAGTCTAAAGGCTTTGGTTTCATCACTCCTGCTGACGGCAGCAA AGATGTATTCGTACATTTCTCTGCAATTCAAGGCAACGGCTTCAAAACTCTGGCTGAAGGCCAGAACGTAGAATTCGAAA TTCAGGATGGCCAGAAAGGTCCTTCCGCAGTAAACGTCACTGCGCTGTAA Protein sequence : MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPSAVNVTAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18076.1 | unknown | Not tested | TTSS locus | Protein | 3e-19 | 72 |
| cspH | YP_216241.1 | cold shock protein-like protein | Not tested | SPI-11 | Protein | 5e-06 | 44 |
