|
Name : rplY (ECA2745) Accession : YP_050836.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L25 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1825 EC number : - Position : 3086967 - 3087251 bp Length : 285 bp Strand : + Note : the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress respo DNA sequence : ATGATTACTATCAAAGCAGAAGCACGTCAAGGTCAGGGTAAGGGTGCGAGCCGCCGCCTGCGTTCCGCTGGTAAATTCCC AGCCATCGTTTACGGTGGTTCAGAAGCACCAGTATCTATCGAACTAGATCACGATTCAGTAAAAAACCAAGAAGTGAAAG AAGGCTTCTACGGTGAAACACTGATCCTGTCTATCGATGGCAAAGAAGTTCAAGTTAAAGTTCAGGCTGTACAACGTCAC GTTTACAAGCCTAAACTGACTCACATCGACTTCGTTCGCGTTTAG Protein sequence : MITIKAEARQGQGKGASRRLRSAGKFPAIVYGGSEAPVSIELDHDSVKNQEVKEGFYGETLILSIDGKEVQVKVQAVQRH VYKPKLTHIDFVRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_01051 | YP_001437155.1 | 50S ribosomal protein L25 | Not tested | Not named | Protein | 1e-30 | 76 |
