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Name : rnhA (ECA3340) Accession : YP_051429.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 3749751 - 3750215 bp Length : 465 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCGCAAACAGGTAGAAATTTTCACCGACGGATCTTGTCTCGGTAATCCCGGCCCCGGCGGTTATGGCGCCGTGCTGCG CTACAAGCAGCACGAAAAAGCGTTGAGTGCAGGCTATCGTCTTACGACGAATAACAGAATGGAGTTGATGGCCGCTATTG CAGCGCTTGAAACACTGACCACCGACTGTGACATCGTACTCAGCACAGACAGTCAATATGTTCGTCAGGGTATCACCAGT TGGATTCATAACTGGAAAAAGCGTAGTTGGAAAACCGCTGACAAAAAGCCGGTCAAAAATGTCGATCTCTGGAAAAGGCT GGATACTGCGATTCAACGCCATTCCGTGCGTTGGGAATGGGTAAAAGGGCACGCTGGTCACCCAGAAAACGAGCGCTGCG ATGAACTCGCTCGCGCTGCCGCCAGTGCGCCAACGCTTGATGACACCGGTTATCAGGCTGAATAA Protein sequence : MRKQVEIFTDGSCLGNPGPGGYGAVLRYKQHEKALSAGYRLTTNNRMELMAAIAALETLTTDCDIVLSTDSQYVRQGITS WIHNWKKRSWKTADKKPVKNVDLWKRLDTAIQRHSVRWEWVKGHAGHPENERCDELARAAASAPTLDDTGYQAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 5e-54 | 77 |
