Gene Information

Name : ECA3445 (ECA3445)
Accession : YP_051535.1
Strain : Pectobacterium atrosepticum SCRI1043
Genome accession: NC_004547
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3863466 - 3863969 bp
Length : 504 bp
Strand : -
Note : Similar to Rhizobium leguminosarum ImpB SWALL:Q93ED2 (EMBL:AF361470) (181 aa) fasta scores: E(): 2.6e-09, 32.66% id in 150 aa, and to Yersinia pestis conserved hypothetical protein y0037 SWALL:AAM83632 (EMBL:AE013605) (166 aa) fasta scores: E(): 5.6e-39,

DNA sequence : 
ATGGCAAAAGGAACTGATGGTGCATCTGTCGCACCAAAGGAACGTATTAATATCAAATATGTTCCGGCCACTGGTGGTCA
GCAGGCGGAAATAGAATTGCCGTTAACGCTGATGATCGTGGGAAATATGAAAGGGCGCACAGAGGAAACGCCGATCGAGG
AACGTCAGACCGTATCGATCGATAAAAACAATTTTACCTCCGTGATGAAAGAAGCAAATCTGGAACTGAATTTCAGTGTG
CCAAATCGCCTTGAAGAAGAAAGTCAGGACGACCTGCCAGTGAAATTGAGCATCGGCGGTTTGAATGATTTCTCCCCTGA
CCGCATTGCCCAGCAAGTGCCTGAATTACGTAAGCTGCTTGATTTACGTGAGGCACTGGTCGCGCTGAAAGGCCCCCTCG
GCAATATTCCCTCATTCCGTAATCGTTTGCAGGATCTGTTGTCCAGCGAAGAAGCCAGAGAGCAGCTTTTAAAAGAGCTC
GAGCTGGTGAAACCCGCCGAATAA

Protein sequence : 
MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMIVGNMKGRTEETPIEERQTVSIDKNNFTSVMKEANLELNFSV
PNRLEEESQDDLPVKLSIGGLNDFSPDRIAQQVPELRKLLDLREALVALKGPLGNIPSFRNRLQDLLSSEEAREQLLKEL
ELVKPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-35 54
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-42 51
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 8e-43 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECA3445 YP_051535.1 hypothetical protein VFG2092 Protein 3e-49 61
ECA3445 YP_051535.1 hypothetical protein VFG2474 Protein 1e-37 50