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Name : ECA4278 (ECA4278) Accession : YP_052365.1 Strain : Pectobacterium atrosepticum SCRI1043 Genome accession: NC_004547 Putative virulence/resistance : Unknown Product : Rhs-family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 4792990 - 4797273 bp Length : 4284 bp Strand : + Note : Similar to Photorhabdus luminescens Rhs Rhs-corE SWALL:AAN64198 (EMBL:AY144117) (1469 aa) fasta scores: E(): 3.6e-127, 42.61% id in 1361 aa, and to Escherichia coli O157:H7 rhs core protein with extension ecs0605 SWALL:Q8X2J4 (EMBL:AP002552) (1616 aa) fas DNA sequence : ATGCGTGATGAAATTCTGGCTCGTATTGCGCGGGTGGGTGCGATGCACGCCGGCAACCGCCCCACGCTGCCGCCCGATTT ACCCGCACCCGGCAGTGGTTCTCCCCCCACTTCACCGGACAAGCCCATCAAACACAGCAGCTTTCTGGGGGCGTTGCTCG GTGCCGTTGCCGGGGCCCTAGTGGCGGCAGCAGTTGCCGCGGTCGCGGTCGCGTTGGTCGGGGTGACGGGCGGGCTGGCG ATTGCACTGGTAGGCGGATTGGCGGTACTGGGGGCGGGTAGTCTGATATCTGCGGTAAGTGGCCGGGTATCCGCCATGGT AGACAGCGCCTCGCCGCCCGCCGGAGCGGTGGCTGACGGTTCACCTAACGTGTCTGTTGAAGGCAACCCTGTATCCCGGG CGGAAGTCGATGCAGTGGCGTGTACCAAACATAGCGGCCCGCAACTCATTGCACAGGGCAGCGAAACCGTCTTCGTTAAC GGTCATCCGGCCGCGCGGATAGGCGATAAAACCGTGTGTGGTGCTACCATCAAGGAAGGAGCATCTACCGTATTCTTTGG CTCCGGACAGGCTACGGTACTGGAGATACAAGATGAGTTCAGCGGTTGGCAGAAAGCGCTGCTGATTGCGGTGGAATTTC TTGTGCCACCGACGCGTGGGTTATTTCGCGGGCTGGGGAAATTATTCTTTCGCGGCCCTAAAGCGGTCATGAAAGGGCTG GGTGCCGGAGCTCTCTGGGCGGGTAAACGCTTTAAGCAAAAGACACGCTGTGCCACCCGCGCATTTAAGGCGAACAAAGG CCGGGCGCGGGTGACCCAAGCGGCCAAAGCCTTCAAGAAAGACCCAGTGTATATCGCCAGCGGCGAGGTGATTGAAAACC GCACTGATATCGAACTGGGGCAGACTCTTCCACTGGTGTTCGAACGCACCTACCGTACCGCCTCTTCACATGTCGGATTA TTAGGCCATGGCTGGCAGGATAGCTGGAGCGAAGTCGCTACCGTCAGCCGTGATGACGGCGACACCCATGTAGTCATTAC ACTGGCACAGGGCTACAACATCGATTTCACCTTCGGGGTGGGCACTACGGTGGTGTACTGCGCCGAATACCCGGAGTTCA AACTAGTTAGGCGGCATAACGGCTTTCACCTGTGGCACCGTGACAGCCAGACCTGGCGTGCGTTTACCGTCAGGCAGGAT GACCAGCTATTGTTGTCGGCCATCACTGACAACCATTTCAACCGAATCGATTTTATCCGCGACCCCAAAGGCTACCTGCG CAAGGTGCAGCACAGCGACGGCATCGAGCTGCTGCTGGTATGGCAAGGGGAATTTCTCCGCCAGGTGCAACGTATCGACG GCGGGCAGAAAACCGTGCTGGCCGAATACCGGCAGGATGAACAAGGGAGACTGATCGAGGCCGATGCGGCGCATGCCTAT CACCTGTTCTACGAGTACGATAACCACAACCGCTTGGCGCGCTGGCACGACAACGACCAGACCTGGGCACAGTATGAATA TGACCATCAGGGGTGCTGCATTTACACCACCTGCGCCGACGGCTACCTGACCGCCAACTTCGAGTATCTGGCAGACCGCG TGGTGATGACAGACGGGCTGGGACAACGCCATGAATATGGCTTTAATGACCTGTACCTGATGACATGGGAGAAATCCCCG CTCGGCCATATCACCCGCTTTGAGTATGACGATGTCGGTAATCTGCTACGGGAAATCTCCCCTGCGGGCCGGATGGTGGA ATTTGCCTATCTGGGCGACAGCGGGCTGGTCAGTACCTTCACCGATGGCAGTGGCCATCAATGGCATTACGACTATGACG ACAGCGATCGCCTCACCAGTATCACCGACCCTCTCGGGCGCAACTGGGTCTGGCAGTACGACACGAAGGGCAATCCGCAA AGCCTGACCGGGCCGGACAACAGCGAAGTGCATTTTGCGTGGAACCGCTACGGCCTGCTGACCGAAGTCAGTGACCAAGG TGGACAGGTGCAGGCCAGTCTGTTTTACGACCATCGACAGCGCCTGCTCAGTGCCACGGATGCGGAGTCCCGCACTCAAC AACTACGCTACGACCAACAGGACAGACTGACCACCTGGACACGCCCGGACGGTTCCACCTATCGCTTGGGTTATCGCCGT GCCAGTTGGAAACTGCCGGAACAACTGCTACGCCCAGACGACAAGCAAGAACAGCGTCAATACGACAAACACAACAACCT ACTGAATTACACTGATGGCAACGGCGCGGTTTGGCGGCAAACCTATGGCCCATTCGATCTTCTGACGTCCCGTACCGATG CGGAAGGCCGCACCTGGCGTTACGAGTACGACAAAGAGAGCCAACAACTCGTCGCTGTTATCGCCCCAGATGGGAACCGC TGGCAATGGTGGTTGGATGCCGATGCACGGGTTATCCGCGAGCAGGATATGGCTGGCACCGAAACTCGCTACGGCTATGA CGAGGATGGCCACTGCATTAGCATCCACAACGGCGAAGGCGAAACCCGCCACTTCCTGTACGACGGACGCGGGCTACTCA TCAAAGAAACCGCACCGGACGATACGCTGCACTACCGCTACGATGGGGCAGGCCGACTTACTGAAGTGACGTCTGCGACC AGCTATATCCAGTTGTCGTATGACGTACGAGACCGAGTGGTGCAGGAACGGAACAGCGGAACAGAAATCCGACGCCACTA TCAGGCAGAGTCTGACGCCGTTACCCGCAGCTTGTACTGGGAAGGCGAAGAGAGCAGCGCGGCACTCACCAGCACCTTCC GCTATAGTGCCACGGGTGAACTGCGGCAGGTGCAGTTGCCGGATGACGCAGAGCTAACGTTGGCTCACGACGCCGCAGGA CGAGAAGCCGCCCGAAATAGCAACGGCGGCTTTATGCAGCAGCGCGAATACGACGCCATGGGCTGGCTGACGCGCGAGAT GAGTGGGCAGCAGCGGGATGGTCGTTTACAGGCCGAACAGAGCCGTGAACATTTGTATGATGGCGCAGGCAACCTAACGG GCACCCGGCACAACCGCGAGGCCGAAGGCTACCGGTTGGATGCCAGCGGACGAGTGCTAACCGTCCTGAGCGGCGGCACA GGCCGTACCGTCAATACCGAAGAAGAATACCGCTACACCCGCACCGGCCTGCCGCAGGACGCCACAAGATTGACCGAGTG GCAAGCGAGCAGGCTTATTCAGCGTGACGATACCCACTATCAGTACGACAAAGCCGGACGGCTGATACGCAAACAGGTGG TACAGCCAGGCTACCGGCCGCAGGTTTGGCACTACCGCTGGGACAGTCGTAACCAGCTCAGAGTGGTGGATACGCCAACG GGTGAGCGCTGGTTCTACCGTTACGACCCATTCGGGCGACGCACCGGCAAACGCTGTGACCAGAAAGCAGAAGACATCCG TTACCTCTGGGACGGCGACCAGATAGCTGAAGTGCGGCATTACCGCGAAAACCAGCTCATCAGCCGCCGCCACTGGGTAC ACAATGGCTGGGAGTTGCTGGTGCAACAGCGCCAGAATACCGACGGGAATTGGGAGACGGATTTTGTCACCAGCAGCCAT AACGGCGAGCCGCAGGCTATCTTTAATCAGGCTGGTGAGCTTCGCTGGCAGGCGCCGCGCACGAACTTATGGGGGCACCG GACTACAGATAATACTGAAAGTCTCGATCCGGGGCTGGCATTTGCTGGGCAATACCGTGACGAAGAAAGTGGCTTATGCT ATAACCGATTTCGGTATTATGATCCAAGCGGTGGTTGCTATATCTCACCTGACCCGATAGGGATAAGAGGTGGTCTTAAC CTTTATGCGTATGTTAAAAACCCTGTAAATTGGATCGATCCGAAAGGGTTAGCTGGATGTAATATAGTCCATAGGGCGGT GACTCCTGAACAAGCAGCAAGTATCCGAGCAGGCAATGGAATATCAAGGCCGACTCCATATCATAGAACGACACCGACTC AGCATGTAGCAGGAGCACCGCACTCGCGTGATCCGTGGATATCAACAACTAGAAGTCAATCAACAGCAGAATACTTCGCC ACTCATGGTGGAACCCAAGCAGCAAATCCAATTGTTAATATAGATCTGTCTAAAATTCCGAGCGATAAGATTTTAGATGT ATCAAACGCTCAAAAGGCTGCGGAACATTTGCAGACTCCATTCACCCGAAATGTAGCGGCAGCCCACCAAGAAGTATTAA TCTTTGGAGAAATACCATCGGAAGCGATAATTGGATTTTTATAG Protein sequence : MRDEILARIARVGAMHAGNRPTLPPDLPAPGSGSPPTSPDKPIKHSSFLGALLGAVAGALVAAAVAAVAVALVGVTGGLA IALVGGLAVLGAGSLISAVSGRVSAMVDSASPPAGAVADGSPNVSVEGNPVSRAEVDAVACTKHSGPQLIAQGSETVFVN GHPAARIGDKTVCGATIKEGASTVFFGSGQATVLEIQDEFSGWQKALLIAVEFLVPPTRGLFRGLGKLFFRGPKAVMKGL GAGALWAGKRFKQKTRCATRAFKANKGRARVTQAAKAFKKDPVYIASGEVIENRTDIELGQTLPLVFERTYRTASSHVGL LGHGWQDSWSEVATVSRDDGDTHVVITLAQGYNIDFTFGVGTTVVYCAEYPEFKLVRRHNGFHLWHRDSQTWRAFTVRQD DQLLLSAITDNHFNRIDFIRDPKGYLRKVQHSDGIELLLVWQGEFLRQVQRIDGGQKTVLAEYRQDEQGRLIEADAAHAY HLFYEYDNHNRLARWHDNDQTWAQYEYDHQGCCIYTTCADGYLTANFEYLADRVVMTDGLGQRHEYGFNDLYLMTWEKSP LGHITRFEYDDVGNLLREISPAGRMVEFAYLGDSGLVSTFTDGSGHQWHYDYDDSDRLTSITDPLGRNWVWQYDTKGNPQ SLTGPDNSEVHFAWNRYGLLTEVSDQGGQVQASLFYDHRQRLLSATDAESRTQQLRYDQQDRLTTWTRPDGSTYRLGYRR ASWKLPEQLLRPDDKQEQRQYDKHNNLLNYTDGNGAVWRQTYGPFDLLTSRTDAEGRTWRYEYDKESQQLVAVIAPDGNR WQWWLDADARVIREQDMAGTETRYGYDEDGHCISIHNGEGETRHFLYDGRGLLIKETAPDDTLHYRYDGAGRLTEVTSAT SYIQLSYDVRDRVVQERNSGTEIRRHYQAESDAVTRSLYWEGEESSAALTSTFRYSATGELRQVQLPDDAELTLAHDAAG REAARNSNGGFMQQREYDAMGWLTREMSGQQRDGRLQAEQSREHLYDGAGNLTGTRHNREAEGYRLDASGRVLTVLSGGT GRTVNTEEEYRYTRTGLPQDATRLTEWQASRLIQRDDTHYQYDKAGRLIRKQVVQPGYRPQVWHYRWDSRNQLRVVDTPT GERWFYRYDPFGRRTGKRCDQKAEDIRYLWDGDQIAEVRHYRENQLISRRHWVHNGWELLVQQRQNTDGNWETDFVTSSH NGEPQAIFNQAGELRWQAPRTNLWGHRTTDNTESLDPGLAFAGQYRDEESGLCYNRFRYYDPSGGCYISPDPIGIRGGLN LYAYVKNPVNWIDPKGLAGCNIVHRAVTPEQAASIRAGNGISRPTPYHRTTPTQHVAGAPHSRDPWISTTRSQSTAEYFA THGGTQAANPIVNIDLSKIPSDKILDVSNAQKAAEHLQTPFTRNVAAAHQEVLIFGEIPSEAIIGFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rhs-core | AAN64198.1 | Rhs | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 42 |
