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Name : gap (TW472) Accession : NP_789401.1 Strain : Tropheryma whipplei TW08/27 Genome accession: NC_004551 Putative virulence/resistance : Unknown Product : glyceraldehyde 3-phosphate dehydrogenase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : 1.2.1.12 Position : 505638 - 506651 bp Length : 1014 bp Strand : - Note : Similar to Corynebacterium glutamicum glyceraldehyde 3-phosphate dehydrogenase Gap or cgl1588 SWALL:G3P_CORGL (SWALL:Q01651) (336 aa) fasta scores: E(): 2.2e-80, 59.58% id in 339 aa DNA sequence : GTGACGGTCAAAATAGCAATTAATGGCTTTGGAAGAATTGGTCGTGGCTTTTTCAGGGCTTTATCTTCTCCCTCGTGCAT TGATGGTCCTGAGATAGATGTTGTTGCAATTAATGACCTGACCTCGCCTGAAGTGTTGGCGCATCTTCTAAGACGGGACA CAATTTTTGGGCGCTTCCCTGAAAGTGTTTGCCATGATGGCACCAAGTTACTTGTTGGAAAAAGGGAGGTCGCAGTTTTT TCCGAAAAAGACCCCTCTTCAATTCCATGGAATGGTGTTGATATCGTCATAGAGTCAACGGGTTTATTTACAGATGCAAA TATCGCGTCTGGACATATAACTGCCGGCAGTAAGCGGGTTATAATTTCCGCACCGGCAAAGAACGAGGATGCCACCTTCG TCGTTGGTGTCAACCATACAGACTATGATCCAAACAAGCACAGCATAGTGTCTAATGCTTCGTGTACTACAAATTGCCTG GCGCCCCTGGCAAAGGTTTTTGATGATACGTTCGGCATAGAGCGTGGCCTGATGACAACCGTCCACGCATACACGGCTGA TCAGAGGTTGCAGGACGCACCGCATAGTGATTTGCGGCGTGCGCGAGCAGCGGCAATGAACCTCGTTCCGACATCCACCG GCGCGGCGTGCGCGATAGGATTGGTTCTCCCAAATCTCAAGGGGAAGCTTGATGGGTTTGCCATCAGAGTTCCTGTTATA ACGGGATCAATAACAGATCTCTCACTTGTGTCAAAAACAGATGTTTCCGCTCCGGAGGTCAATGAGGCCTATAGACGAGC GGCATTGGGCCCCCTGAAAGGGATCCTCTGTTATTCAGAGGATCCGCTTGTTTCAAGTGATATAGTCGCTGACGGTCATT CTTGTATATATGATGCCAATCTTTTGCGGATTTCTGGCAATATGGTCAAGCTATCTGCCTGGTATGACAATGAATGGGCA TATTCTCGGCGGCTGGTTGATTTGGCCAAATATATGGCGTCTGTTGGGCTCTGA Protein sequence : MTVKIAINGFGRIGRGFFRALSSPSCIDGPEIDVVAINDLTSPEVLAHLLRRDTIFGRFPESVCHDGTKLLVGKREVAVF SEKDPSSIPWNGVDIVIESTGLFTDANIASGHITAGSKRVIISAPAKNEDATFVVGVNHTDYDPNKHSIVSNASCTTNCL APLAKVFDDTFGIERGLMTTVHAYTADQRLQDAPHSDLRRARAAAMNLVPTSTGAACAIGLVLPNLKGKLDGFAIRVPVI TGSITDLSLVSKTDVSAPEVNEAYRRAALGPLKGILCYSEDPLVSSDIVADGHSCIYDANLLRISGNMVKLSAWYDNEWA YSRRLVDLAKYMASVGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 4e-49 | 41 |
