Gene Information

Name : 16S_rRNA (TWr03)
Accession : -
Strain : Tropheryma whipplei TW08/27
Genome accession: NC_004551
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 680284 - 681809 bp
Length : 1526 bp
Strand : -
Note : -

DNA sequence : 
TTATTATGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGGAAATCAGGG
AGCTTGCTCCCTGTGATTAGTGGCGAACGGGTGAGTAACACGTGAGCAACCTGCCCCTAACTTTGGGATAACTTCGGGAA
ACCGGGGCTAATACCAAATACGACCCATGAGGGCATCCTCTGTGGGTGGAAAGAATTTCGGTTGGGGATGGGCTCGCGGC
CTATCAGCTTGTTGGTGGGGTAACGGCCTACCAAGGCATCGACGGGTAGCCGGCCTGAGAGGGTGATCGGCCACACTGGG
ACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCAACGC
CGCGTGGGGGAAGAAGGCCTTCGGGTTGTAAACCTCTTTTGGCAGGGAAGAAGCGAAAGTGACGGTACCTGCAGAAAAAG
CGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTC
GTAGGCGGTTTGTCACGTCTGCCGTGAAAATCCGAGGCTCAACCTCGGACCTGCGGTGGGTACGGGCAGGCTAGAGTGCG
ATAGGGGAGAGCGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGCTCTCT
GGGTCGCTACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGTT
GGGCGCTAGACGTGGGGGTGGTTCCACCGCTTCCGTGTCGCAGCTAACGCATTAAGCGCCCCGCCTGGGGAGTACGGCCG
CAAGGCTAAAACTCAAGGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCAATGCAACGCGAAGAA
CCTTACCAAGGCTTGATATATACCGGAAAGGCGTAGAGATACGCCCCCCGCAAGGTCGGTATACAGGTGGTGCACGGTTG
TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTCCTGTGTTGCCAGCGCGTAATGG
CGGGGACTCACAGGAGACTGCCGGGGTCAACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCTTCGGTCTTGG
GCTTCACGCGTGCTACAATGGCTGGTACAGAGGGTTGCAATATCGCAAGGTGGAGCGAATCTCAAAAAGCCAGTCTCAGT
TCGGATTGGGGTCTGCAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAATGCTGCGGTGAATACGT
TCCCGGGCCTTGTACACACCGCCCGTCAAGTCATGAAAGCTGGTAACACCCGAAGCCGGTGACTTAACCTTTTTTGGAGA
GAGCCGTCGAAGGTGGGATTGGTGATTGGGACTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACCTC
CTTTCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-131 87
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-131 87
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-131 86.9
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-131 86.9
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-131 86.4
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-131 86.4