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Name : ccmF (PD1479) Accession : NP_779674.1 Strain : Xylella fastidiosa Temecula1 Genome accession: NC_004556 Putative virulence/resistance : Unknown Product : c-type cytochrome biogenesis membrane protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1721900 - 1723840 bp Length : 1941 bp Strand : + Note : - DNA sequence : ATGCTGCCTGAGTTTGGCCAGATCCTCCTGATCCTCGCCCTGCTGACAGCACTGCTGCAGGGACTGCTTCCCCTGATTGG CGCCCAGCGCCGCCGCACTGCTTGGATGGCCGTTGCACGCCCAGCCGCCTATGTGCAACTGAGCCTGCTCGCTAGCGCAT TCGCACTGCTCACCTATGCCTTCCTCGGCAACGACTTCTCCGTCCAGTACGTCGCCGAAAACTCTCATTCACTGCTACCC ACCCTCTACCGCTCTACCGCCGTGTGGGGTGCCCACGAAGGATCCCTCCTACTCTGGGTATTACTCCTGGCAGGATGGAC CGCCAGCGTCGCCTTACGTTCCCACACCCTCCCAGCCACCCTGAGCGCACGCATCCTTGGCGTCCTGGGCCTGATTGCAC TCGGCTTCCTCGCACTGATCCTCTTCACCTCCAACCCATTCGCACGTCTCCTGCCTGCCGTCCCAGAAGGGAACGACCTC AACCCGTTGCTGCAAGATCCCGGAATGATTCTGCATCCCCCCCTGTTATATGCCGGCTACATCGGTTTGGCGGTACCATT CGCCTTTGCCGTCGCGGTCCTGCTGGAAGGACGGATAGAGCCAGCCTGGCTACGCTGGAGCCGACCTTGGACCAACATCG CCTGGGCACTGCTGACCTTGGGCATTGCCCTGGGCAGCTGGTGGGCCTATTACGAACTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCAGTGGAAAACGCCAGCTTCATGCCTTGGCTCATCGGTGTCGCACTGATTCATTCCCAAGCGATCACCGACAA ACGCGGCAGCTTCACCCAATGGACACTCCTGCTCGCAATCACCGCCTTTGCACTAGCACTGCTTGGCACATTCCTCGTTC GCTCAAGCGTACTGACCTCAGTCCATGCCTTTGCTGCTGATCCGGTACGCGGCACGTTTATTCTGCTGCTCATCTTCACG TTGATTGGCGGCGCACTGCTGCTGTATGCACGGCGTGCACCGCAGCTCACCCCCGTCACAATGGACATGCAACAACGCTT TACACCCGTCTCACGCGAAACCCTATTACTGCTCAACAACCTATTGCTGACCTGCGCCTGTGCGATGGTACTGCTAGGCA CCCTCTATCCCCTGCTGGCCGATGCACTGGCACTGGGTCAACTTTCAGTCGGCCCACCCTACTTCGGCCCCCTATTCACC CTGCTGATGACACCACTAATCGTCTTACTGCCATTGGGTCCATTCACCCGATGGCAACGCGAACACCCCTCAACACCCCT CGTATTGCTGGCCCCTTGGGCCGCACTGAGCCTGGTTGTCGCCGCACTGGCTGGCATCGCCACACCACAACACCATTGGA AAACCATGCTCAGCGTGGCCGCGGCAGCATGGGTACTCCTAGGAACCCTCCGCTTCCTCTGGTGGCACTGGCGCACCACC GAATCCCGTCCCACCCCCAGCACCCTGGGCATGGTCCTGGCACACGCCGGAATTGGCGTCTTCCTCACTGGTGCGCTGTT AGTTGAAACACTCAGCCTACAACGTGAAATTGCACTCACCCCTGGCCAGACACTCACCCTCGGCCCCATCACCCTACACT TTGATGCCATCCTCGAACACCACGGCCCCAACTACGTGGCTGATCGCGCCCAATTCAGCCTATTACGCAACACGCATCCC CTGGGCACCCTGACGACAGAAAAACGCCGCTATGTCAGTGGCGGCCAAGTCACCACCGAAGTTGGCATCCATCCTGGAGC GCTCGGTGATATTTACGTCGCCTTAGGAGAATCGCTCGGCAATGGGTCATGGGCAATTCAGGCACACTACAAACCATTCG TCCGCTGGATCTGGCTGGGCGCAGCACTGATGGCCCTGGGCGGGCTGATCGCTGCTGCTGATCGCCGGTTCCGCCACCAC CCGGAGTCATCGCATGTCTGA Protein sequence : MLPEFGQILLILALLTALLQGLLPLIGAQRRRTAWMAVARPAAYVQLSLLASAFALLTYAFLGNDFSVQYVAENSHSLLP TLYRSTAVWGAHEGSLLLWVLLLAGWTASVALRSHTLPATLSARILGVLGLIALGFLALILFTSNPFARLLPAVPEGNDL NPLLQDPGMILHPPLLYAGYIGLAVPFAFAVAVLLEGRIEPAWLRWSRPWTNIAWALLTLGIALGSWWAYYELGWGGWWF WDPVENASFMPWLIGVALIHSQAITDKRGSFTQWTLLLAITAFALALLGTFLVRSSVLTSVHAFAADPVRGTFILLLIFT LIGGALLLYARRAPQLTPVTMDMQQRFTPVSRETLLLLNNLLLTCACAMVLLGTLYPLLADALALGQLSVGPPYFGPLFT LLMTPLIVLLPLGPFTRWQREHPSTPLVLLAPWAALSLVVAALAGIATPQHHWKTMLSVAAAAWVLLGTLRFLWWHWRTT ESRPTPSTLGMVLAHAGIGVFLTGALLVETLSLQREIALTPGQTLTLGPITLHFDAILEHHGPNYVADRAQFSLLRNTHP LGTLTTEKRRYVSGGQVTTEVGIHPGALGDIYVALGESLGNGSWAIQAHYKPFVRWIWLGAALMALGGLIAAADRRFRHH PESSHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-92 | 51 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-76 | 50 |
