Gene Information

Name : PD0687 (PD0687)
Accession : NP_778909.1
Strain : Xylella fastidiosa Temecula1
Genome accession: NC_004556
Putative virulence/resistance : Virulence
Product : Shf protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 842526 - 843380 bp
Length : 855 bp
Strand : -
Note : -

DNA sequence :

ATGAGCCGTGCAACAGCCGTCCCTGTCCTCATGCACCATCACGTTTCACCATCAACGGGCATGATCACCGTCTCCCCGGA
ACACTTTGAAAGCCAGATTGCATGGCTGGCGAATGACGGCTGGACCTCACTCACCCTGGAGCAATACGCCGGCTTTCTCG
CCGGTCAACCCGTGCCGCACAAATCGATCGTGATTACCTTCGACGACGGCTATCTGGATAACTGGGTCTACGCACATCCG
ATCTTGCAGAAATACCACATGCATGCCGTCGTTTTCATTGTCACCAGCTGGATTAGCGATGGCCCAGCGCGTCCCCATGC
TGGACAATCCGGCGCGATATTGCCCACAACGCCAAACCACCATGCGTGCGAAACAGCCATCCTGCATGAGGGGCGCACCG
ACGAAGTGATGCTACGTTGGAGCGAAGTGCAAGCAATGATCGCCGCAGGCACCTTTGAGGCACATTGCCATACACACACC
CATACACGCTGGCTAACACTACAACTCAGCCGCGCCCAACGACGCGAAGGTCTCGACCGGGACCTCATCACCGCACGTAC
AGTACTGCAACAACGCCTAGGCAACGTCTCCAACACACTGTGCTGGCCATACGGCGACTTCGATGCAGACCATATCGAAA
TCGCACGCGCCCATGGCTTTCGCTATTTCCACACCACACATCCCTTTGGACGCAACGTCATTGGCGGCAACCCAGAACAC
ATCTACCGCTTCGCGCTCCGTAACCGCCCGGGGCACTGGCTGCGCAAACGCATCGCGCTCAGCTACCACCCACTCATTGC
ACCATTATTCAACCGCTTCAAAAGCCATAAAAAAGGCATGCAGCCGGGTCCATGA

Protein sequence :

MSRATAVPVLMHHHVSPSTGMITVSPEHFESQIAWLANDGWTSLTLEQYAGFLAGQPVPHKSIVITFDDGYLDNWVYAHP
ILQKYHMHAVVFIVTSWISDGPARPHAGQSGAILPTTPNHHACETAILHEGRTDEVMLRWSEVQAMIAAGTFEAHCHTHT
HTRWLTLQLSRAQRREGLDRDLITARTVLQQRLGNVSNTLCWPYGDFDADHIEIARAHGFRYFHTTHPFGRNVIGGNPEH
IYRFALRNRPGHWLRKRIALSYHPLIAPLFNRFKSHKKGMQPGP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
shf	AAL08449.1	putative protein Shf	Not tested	SRL	Protein	2e-40	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PD0687	NP_778909.1	Shf protein	VFG1040	Protein	1e-40	43