Gene Information

Name : rrs (TWTRNA11)
Accession : -
Strain : Tropheryma whipplei Twist
Genome accession: NC_004572
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 213475 - 214999 bp
Length : 1525 bp
Strand : +
Note : -

DNA sequence : 
TTATTATGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGGAAATCAGGG
AGCTTGCTCCCTGTGATTAGTGGCGAACGGGTGAGTAACACGTGAGCAACCTGCCCCTAACTTTGGGATAACTTCGGGAA
ACCGGGGCTAATACCAAATACGACCCATGAGGGCATCCTCTGTGGGTGGAAAGAATTTCGGTTGGGGATGGGCTCGCGGC
CTATCAGCTTGTTGGTGGGGTAACGGCCTACCAAGGCATCGACGGGTAGCCGGCCTGAGAGGGTGATCGGCCACACTGGG
ACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCAACGC
CGCGTGGGGGAAGAAGGCCTTCGGGTTGTAAACCTCTTTTGGCAGGGAAGAAGCGAAAGTGACGGTACCTGCAGAAAAAG
CGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTC
GTAGGCGGTTTGTCACGTCTGCCGTGAAAATCCGAGGCTCAACCTCGGACCTGCGGTGGGTACGGGCAGGCTAGAGTGCG
ATAGGGGAGAGCGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGCTCTCT
GGGTCGCTACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGTT
GGGCGCTAGACGTGGGGGTGGTTCCACCGCTTCCGTGTCGCAGCTAACGCATTAAGCGCCCCGCCTGGGGAGTACGGCCG
CAAGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCAATGCAACGCGAAGAA
CCTTACCAAGGCTTGATATATACCGGAAAGGCGTAGAGATACGCCCCCCGCAAGGTCGGTATACAGGTGGTGCACGGTTG
TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTCCTGTGTTGCCAGCGCGTAATGG
CGGGGACTCACAGGAGACTGCCGGGGTCAACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCCTTCGGTCTTGG
GCTTCACGCGTGCTACAATGGCTGGTACAGAGGGTTGCAATATCGCAAGGTGGAGCGAATCTCAAAAAGCCAGTCTCAGT
TCGGATTGGGGTCTGCAACTCGACCCCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAATGCTGCGGTGAATACGT
TCCCGGGCCTTGTACACACCGCCCGTCAAGTCATGAAAGCTGGTAACACCCGAAGCCGGTGACTTAACCTTTTTGGAGAG
AGCCGTCGAAGGTGGGATTGGTGATTGGGACTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACCTCC
TTTCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-131 87.1
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-131 87.1
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-131 87
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-131 87
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-131 86.5
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-131 86.5