Gene Information

Name : PSPTO_1207 (PSPTO_1207)
Accession : NP_791039.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate transport protein fecA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 1321452 - 1323800 bp
Length : 2349 bp
Strand : -
Note : similar to SP:P13036; identified by sequence similarity; putative

DNA sequence :
ATGTCAGCCCGCCCTACCCAACTCTCACCGCTGGTGCGCACGTTGCGCCATGTCATTTTCGGCGCCAGCCTTTCGGTCGG
CAGCCTGTCGATGGCTTATGCTGCCGATGTGGCACCCAAGGTGTATCACATCGCGCCGAGCGAGCTTGAAGCGGCGTTGA
GCCAGTTCGGTCGAGAATCAGGCGTGCTGATTTCCTACGGTTCGCAGATCACCAGCGGTCTGAAAAGCCGTGGGCTGGAA
GGGCAATACACGCCCGAGCAGGGCCTCAATGCCTTGCTCGAAGGTACGGGCTTGCAGGCGATGGCCGACGGTAATAACGG
TTTCACCCTGCAATCGGCCAGTGCCGCTGGCGCACCGATCGAGCTGGGCGCATCCACGGTGATCGGTGACTGGCTGGGTG
AAGCGCAGCAGACCAATGTCTTCGAGCACCCCGGCGCACGTGACGTGGTTCGTCGCGAAGAATTCGAGCGGGTCGGCGCA
ACCTCGGCGCGTGAAGTGCTCAATCGTATCCCCGGCGTCAACGCTCCGGACAACAACGGAACGGGCAGCCATGACATGGC
GCTGAACTTCGGCATTCGTGGCCTCAACCCGCGTCTGGCGTCACGCTCCACGGTATTGATGGACGGCATCCCTGTGCCGT
TTGCGCCTTATGGCCAGCCGCAGCTGTCTTTCGCGCCGATCAGCATGGGCAACATGGACGCAGTGGACGTGGTACGTGGC
GGCGGCGCCGTGCGTTATGGCCCGCAGAACGTGGGCGGTATCGTCAACTTCGTGACCCGCGCCATCCCTGACGCGCCAAC
CCTCAAAGGCGGCATACAGACCGAAACCAGCCCATCGTCCAGCCACGATGGCTTCAAGACCACCGGCAACCTGCTGGCAG
GCGGCACAGCGGACAACGGCCTGGGCGGCGCGATTCTGTATTCCGGCGTGCGCGGCGGTGACTGGCGCGAGCACAGCGAC
ACCCAGATCGACGACTTGATTCTGAAGGGCAAATACCAGATCGACGAGGCCAACAGCCTTAATGCAACGGCGCAGTATTA
CGAGGGCGAAGCACAGATGCCCGGCGGCCTGAGCGTCAAGGATTACGATGCCGATCCGTATCAGTCGACGCGCCTGAAGG
ACAAGTTCTGGGGCCGCCGCACCCTGTTCAACTTCGGCTATCGCTATGAAGAGGATGCGCGCGTATTCACCGCCAACACG
TTCTTTACCAAGACCCTGCGCAGCGGTTATCTCGACCAGGGCAGCTTCGTTTCCCTGTCGCCGCGCGAATACTGGGTGCG
CGGCCTGGAAACACGCTTTTCACAAGGCTTTGCCCTGGGCGAAACCTGGCATGAAGTGGGCGTCGGCTACCGCTACGTCA
ACGAGGCCGGTCACGAACTGCGCTATCGCGAGCCAGTGACCGGCAACCTGCCGACCACCGCCAGCCGCAACGACCGCGAC
ACGCGCGGTGCTACCGAAGCCCATGCGTTCTACATCGATGACCGTATCGACATCGGCAAGTGGACCATCACGCCCGGCGT
TCGCTACGAGATGATCGACACCGCGCAGAACAACAACCTGACCAACGCCAGATACCAGGGCGACTACAGCACTGCGCTGC
CTGCGTTGAACGTGCTCTATCACCTGACCGACACCTGGAACCTGTACGCCAACACCGAAGGTTCGTTCGGCAGCGTGCAA
TACAGCCAGATGCCCAATCGCGTCACCGGGGATGAAGTCAAACCGGAAAAAGCACGCACCTGGGAGCTGGGCACGCGCTA
CGACAACGGCAACCTGCGGGCTGAAATCGGCGCGTTCCTGATCAACTTCGATAACCAGTACGACAGCAACCAGACCAACG
ACACGGTCATCGCACGCGGCGAGACGCGTCATCAAGGGATCGAGACCAGCGTCAACTACGCGCTGGAAGGTCTGAACCCG
ATACTGGCCGGTTACGATGTTTACGCAACGTATGCGTTTGTTGACGCGACCATCCGCGAAGACGGGCCGAACAAGGGCAA
TCGTGTGCCGTTCTCGTCAAAACATAAAGGCACGATGGGCGTCAGCTACACCGAAGGGCCGTGGAAGCTGAATTTTGACA
GTTCATTCCAGAGCGACCAGTTCGCCGACAACGCCAACACAGCAGCGGAAAGCGCCGACGGCAGCACCGGCAAAATCCCT
GGCTACATGCTGTTCAGCACCCGCGCCAACTACGATTTCGGCCCGCAACTGTCGGACCTCAACGTAGCGGTCGGGATGAA
GAACATCTTCAACCGCCAGTACTACACCCGCTCGTTCGACGACAATAACCGCGGCAAATACGTCGGCGAGCCGCGCACGG
TGTATGTGCAGACGTCGGTTGCGTTCTAG

Protein sequence :
MSARPTQLSPLVRTLRHVIFGASLSVGSLSMAYAADVAPKVYHIAPSELEAALSQFGRESGVLISYGSQITSGLKSRGLE
GQYTPEQGLNALLEGTGLQAMADGNNGFTLQSASAAGAPIELGASTVIGDWLGEAQQTNVFEHPGARDVVRREEFERVGA
TSAREVLNRIPGVNAPDNNGTGSHDMALNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRG
GGAVRYGPQNVGGIVNFVTRAIPDAPTLKGGIQTETSPSSSHDGFKTTGNLLAGGTADNGLGGAILYSGVRGGDWREHSD
TQIDDLILKGKYQIDEANSLNATAQYYEGEAQMPGGLSVKDYDADPYQSTRLKDKFWGRRTLFNFGYRYEEDARVFTANT
FFTKTLRSGYLDQGSFVSLSPREYWVRGLETRFSQGFALGETWHEVGVGYRYVNEAGHELRYREPVTGNLPTTASRNDRD
TRGATEAHAFYIDDRIDIGKWTITPGVRYEMIDTAQNNNLTNARYQGDYSTALPALNVLYHLTDTWNLYANTEGSFGSVQ
YSQMPNRVTGDEVKPEKARTWELGTRYDNGNLRAEIGAFLINFDNQYDSNQTNDTVIARGETRHQGIETSVNYALEGLNP
ILAGYDVYATYAFVDATIREDGPNKGNRVPFSSKHKGTMGVSYTEGPWKLNFDSSFQSDQFADNANTAAESADGSTGKIP
GYMLFSTRANYDFGPQLSDLNVAVGMKNIFNRQYYTRSFDDNNRGKYVGEPRTVYVQTSVAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPTO_1207 NP_791039.1 iron(III) dicitrate transport protein fecA VFG1047 Protein 0.0 62