|
Name : gap-1 (PSPTO_1287) Accession : NP_791116.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Unknown Product : glyceraldehyde 3-phosphate dehydrogenase, type I Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0057 EC number : - Position : 1415258 - 1416259 bp Length : 1002 bp Strand : - Note : see PMID:20190049 for expression data DNA sequence : ATGACTCTCCGTATCGCAATCAACGGTTTTGGCCGAATCGGCCGCAACGTCCTACGTGCACTGTATACCCAAGGCTACCG GCAGGACCTGCAGGTCGTCGCCATCAACGATCTTGGCGACAGCGAAATGAACGCGCACCTGCTGCGTTTCGACACTGTAC ACGGCCCGTTCAGCGGCACCGTGGAGTGTGACAAGGAAAGCCTGACCGTCAATGGTGACCGTATTTCGGTCAGCGCCATT CGCAACCCGGCCGAACTGCCGTGGAAAGCGCAGGACATCGACGTGGTATTCGAATGCACCGGCCTGTTCACCAGCCGCGA CAAGGCTGCCGCGCACCTGACCGCCGGCGCCCGCAAGGTGATTATCTCAGCACCGGCCAGCGGTGCCGATGCCACCATCG TCTATGGCGTCAACCACGACACGCTGCGCCAGTCGCACCAGATCATCTCCAGCGCATCGTGCACCACCAACTGCCTGGCC CCGGTCGCCCAAGTGCTGCACCGTGAACTGGGTATCGAAAGCGGCCTGATGACCACCATTCATGCCTACACCAACGACCA GAACCTGATCGACGTCTATCACACCGACCCGTACCGCGCGCGCTCGGCCACCCAGTCGATGATCCCGAGCAAGACCGGCG CTGCCGAAGCGGTGGGCCTGGTTCTGCCGGAACTGGCGGGCAAGCTCACGGGGATGGCTGTTCGCGTGCCGGTGATCAAC GTTTCGCTGGTCGACCTGACCGTCACCCTGAAGCGTGAAACCACGGCCGAAGAAGTCAACGCGCTGATGAAAGAAGCCAG CCAGCACTCCAAGGTCCTGGGTTACAACACCCTGCCGCTGGTTTCACACGACTTCAATCACAACCCGCTGTCGTCGATTT TCGACGCCAATCACACCAAAGTGAGCGGCAAGTTGCTGAAAGTGCTCTCGTGGTACGACAACGAATGGGCGTTCTCCAAC CGTATGCTCGACAACTGCCTGGCGCTGCATAACGCCGAGTAA Protein sequence : MTLRIAINGFGRIGRNVLRALYTQGYRQDLQVVAINDLGDSEMNAHLLRFDTVHGPFSGTVECDKESLTVNGDRISVSAI RNPAELPWKAQDIDVVFECTGLFTSRDKAAAHLTAGARKVIISAPASGADATIVYGVNHDTLRQSHQIISSASCTTNCLA PVAQVLHRELGIESGLMTTIHAYTNDQNLIDVYHTDPYRARSATQSMIPSKTGAAEAVGLVLPELAGKLTGMAVRVPVIN VSLVDLTVTLKRETTAEEVNALMKEASQHSKVLGYNTLPLVSHDFNHNPLSSIFDANHTKVSGKLLKVLSWYDNEWAFSN RMLDNCLALHNAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epd | AAO17215.1 | Epd | Not tested | tcd island | Protein | 6e-75 | 47 |
