Gene Information

Name : PSPTO_1371 (PSPTO_1371)
Accession : NP_791198.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : effector locus protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3781
EC number : -
Position : 1506530 - 1507474 bp
Length : 945 bp
Strand : -
Note : similar to GP:8037798, SP:P32109, GB:U15124, and PID:563996; identified by sequence similarity; putative

DNA sequence :
ATGTCTGGTCCTTTCGAGAAAAAATGGCGGTGTTTCACCCGAACCGTGACCTACGTTGGCTGGTCGCTGTTCTGGCTTCT
GCTCTGGGACGTGGCCGTCACCGTGGACGTCATGCTGATAGAAGGCAAAGGCATCGACTTCCCCCTGATGCCCCTCACGT
TGCTTTGCTCGGCACTGATCGTGCTGATCAGCTTTCGCAACTCGAGTGCCTATAACCGTTGGTGGGAAGCGCGCACCTTG
TGGGGCGCAATGGTCAACACTTCACGCAGTTTTGGCCGGCAGGTACTGACGCTGATCGATGGCGAACGGGATGACCTCAA
CAACCCTGTCAAAGCCATACTCTTTCAACGTCATGTGGCTTACTTGCGTGCCCTGCGCGCGCACCTCAAAGGCGACGTCA
AAACAGCAAAACTCGACGGGTTACTGTCGCCCGACGAGATTCAGCGCGCCAGCCAGAGCAACAACTTCCCCAATGACATC
CTCAATGGCTCTGCTGCGGTTATCTCGCAAGCCTTTGCCGCCGGCCAGTTCGACAGCATCCGTCTGACCCGCCTGGAATC
GACCATGGTCGATCTGTCCAACTGTCAGGGCGGCATGGAGCGCATCGCCAACACGCCACTGCCCTACCCCTACGTTTATT
TCCCACGGCTGTTCAGCACGCTGTTCTGCATCCTGATGCCGCTGAGCATGGTCACCACCCTGGGCTGGTTCACCCCGGCG
ATCTCCACGGTGGTAGGCTGCATGCTGCTGGCAATGGACCGCATCGGTACAGACCTGCAAGCCCCGTTCGGCAACAGTCA
GCACCGGATCCGCATGGAAGACCTGTGCAACACCATCGAAAAGAACCTGCAATCGATGTTCTCTTCGCCAGAGAGGCAGC
CGCTGCTGGCTGACCTGAAAGCCCCGTACCGTGGCGCGTGGCCAACGCATCAATTGGCGGTCTGA

Protein sequence :
MSGPFEKKWRCFTRTVTYVGWSLFWLLLWDVAVTVDVMLIEGKGIDFPLMPLTLLCSALIVLISFRNSSAYNRWWEARTL
WGAMVNTSRSFGRQVLTLIDGERDDLNNPVKAILFQRHVAYLRALRAHLKGDVKTAKLDGLLSPDEIQRASQSNNFPNDI
LNGSAAVISQAFAAGQFDSIRLTRLESTMVDLSNCQGGMERIANTPLPYPYVYFPRLFSTLFCILMPLSMVTTLGWFTPA
ISTVVGCMLLAMDRIGTDLQAPFGNSQHRIRMEDLCNTIEKNLQSMFSSPERQPLLADLKAPYRGAWPTHQLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PSPTO_1371 NP_791198.1 effector locus protein Not tested Hrp PAI Protein 7e-146 100
unnamed AAF71505.1 unknown Not tested Hrp PAI Protein 9e-140 99
unnamed AAT96051.1 Pspto1371-like protein Not tested T-PAI Protein 1e-113 81
unnamed AAT96112.1 Pspto1371-like protein Not tested T-PAI Protein 5e-114 81
unnamed AAT96170.1 Pspto1371-like protein Not tested T-PAI Protein 9e-115 81
unnamed AAT96224.1 Pspto1371-like protein Not tested T-PAI Protein 4e-115 81
unnamed AAT96095.1 Pspto1371-like protein Not tested T-PAI Protein 2e-113 80