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Name : hopM1 (PSPTO_1375) Accession : NP_791202.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III effector HopM1 Function : - COG functional category : - COG ID : - EC number : - Position : 1511461 - 1513599 bp Length : 2139 bp Strand : + Note : previously known as CEL ORF3 (PMID 10781092; Alfano et al, 2000) and HolPtoX (PMID 11872842; Guttman et al, 2002) and HopPtoM (PMID 12940984; Badel et al, 2003); see PMID:20190049 for expression data; similar to GP:8037794; identified by sequence similari DNA sequence : ATGATCAGTTCGCGGATCGGCGGGGCCGGTGGCGTCGAACTCAGCCGGGTAAACCAGCAGCACGATACTGTTCCCGCCCA GACAGCTCACCCAAATGCAGTCACTGCAGGCATGAATCCGCCGCTGACTCCCGATCAGTCAGGGTCACACGCGACAGAAA GCTCGTCTGCCGGCGCGGCGCGGCTGAATGTCGCGGCTCGACACACACAGCTTTTGCAGGCCTTCAAGGCTGAGCATGGG ACGGCTCCGGTCAGCGGCGCGCCGATGATCAGTTCGCGTGCTGCGTTGTTGATCGGTAGTCTGCTGCAGGCCGAGCCTTT GCCTTTTGAAGTCATGGCCGAGAAATTGTCTCCTGAGCGCTATCAACTGAAGCAGTTTCAGGGCTCGGACTTGCAGCAGC GGCTGGAAAAATTCGCCCAGCCGGGTCAGATACCGGATAAAGCCGAGGTCGGGCAACTGATCAAGGGTTTTGCTCAGTCG GTCGCTGATCAACTGGAGCACTTTCAACTGATGCATGACGCTTCGCCCGCAACGGTAGGCCAGCATGCAAAAGCGGACAA GGCGACGCTTGCCGTCAGTCAGACTGCCCTTGGCGAATACGCCGGTCGTGCAAGCAAGGCAATCGGCGAAGGCCTGAGCA ACAGCATCGCGTCGCTGGATGAGCACATCAGTGCGCTGGATCTCACTCTGCAAGATGCCGAACAGGGCAACAAGGAGTCT CTGCACGCTGACAGGCAGGCGCTGGTCGACGCCAAAACCACCCTGGTAGGTTTGCACGCCGATTTCGTCAAGTCGCCGGA GGCCAAGCGCCTTGCTTCGGTCGCCGCACATACGCAACTGGACAACGTCGTCAGCGATCTCGTCACTGCCCGTAACACGG TGGGTGGCTGGAAAGGTGCAGGGCCGATTGTCGCGGCTGCGGTTCCGCAGTTCTTGTCTTCAATGACACACTTGGGTTAT GTGCGTTTGTCCACCAGCGACAAGCTGCGAGACACGATTCCCGAGACCAGCAGCGACGCCAACATGCTCAAGGCTTCGAT AATCGGGATGGTGGCGGGCATTGCTCACGAGACGGTCAACAGCGTGGTCAAGCCGATGTTTCAGGCCGCCTTGCAGAAGA CTGGCCTCAACGAACGCCTGAACATGGTGCCAATGAAGGCTGTGGATACCAATACGGTTATTCCTGACCCCTTCGAGCTG AAAAGCGAACACGGTGAGCTGGTCAAAAAAACGCCCGAGGAAGTCGCTCAGGACAAGGCGTTCGTGAAAAGTGAACGCGC GCTGCTGAACCAGAAGAAGGTTCAGGGTTCGTCCACCCATCCGGTAGGTGAGCTGATGGCTTACAGTGCCTTCGGTGGTT CTCAGGCTGTGCGCCAGATGCTCAACGATGTTCACCAGATCAATGGGCAGACGCTGAGTGCAAGAGCTCTGGCATCCGGT TTTGGCGGGGCGGTGTCTGCCAGTTCGCAAACGCTGCTGCAATTGAAGTCGAATTATGTCGACCCGCAAGGGCGCAAAAT TCCGGTATTTACCCCGGACCGCGCCGAGAGCGATCTGAAAAAGGACCTGCTCAAAGGTATGGACCTGCGCGAGCCGTCGG TACGCACCACGTTCTACAGCAAGGCTCTTTCGGGTATTCAGAGTTCTGCACTGACCTCGGCACTGCCGCCTGTGACCGCT CAGGCTGAAGGCGCAAGTGGCACGCTCAGTGCGGGGGCTATTTTGCGCAACATGGCCCTGGCAGCGACGGGTTCGGTGTC CTATCTGTCCACGTTGTACACCAACCAGTCGGTTACCGCAGAAGCCAAGGCGTTGAAAGCGGCAGGCATGGGCGGTGCAA CACCTATGCTGGACCGTACCGAGACGGCTTTGAATAACATCCGTCATCCGAACAGGGAGTCTCTGCCACATACGTTCCAG AAGAGCACGTTGAGCGGTATCCCACGAGTCGCGGAAAACGCCTATCACATGGGACGAGGCGCATTGCAGTTGCCTACCCA GATGGCCGTGGATACGGTTCGGGTCGTGGATGAAGGTGTGTTGAACGCAGTCGCGTCAGCACGCGAGGCGCTTAAGCAGC CGACAAAAGACGATGACGCATTGAGGGCACTTGAAGAGGGCTTGCTTGACCCGCGTTAA Protein sequence : MISSRIGGAGGVELSRVNQQHDTVPAQTAHPNAVTAGMNPPLTPDQSGSHATESSSAGAARLNVAARHTQLLQAFKAEHG TAPVSGAPMISSRAALLIGSLLQAEPLPFEVMAEKLSPERYQLKQFQGSDLQQRLEKFAQPGQIPDKAEVGQLIKGFAQS VADQLEHFQLMHDASPATVGQHAKADKATLAVSQTALGEYAGRASKAIGEGLSNSIASLDEHISALDLTLQDAEQGNKES LHADRQALVDAKTTLVGLHADFVKSPEAKRLASVAAHTQLDNVVSDLVTARNTVGGWKGAGPIVAAAVPQFLSSMTHLGY VRLSTSDKLRDTIPETSSDANMLKASIIGMVAGIAHETVNSVVKPMFQAALQKTGLNERLNMVPMKAVDTNTVIPDPFEL KSEHGELVKKTPEEVAQDKAFVKSERALLNQKKVQGSSTHPVGELMAYSAFGGSQAVRQMLNDVHQINGQTLSARALASG FGGAVSASSQTLLQLKSNYVDPQGRKIPVFTPDRAESDLKKDLLKGMDLREPSVRTTFYSKALSGIQSSALTSALPPVTA QAEGASGTLSAGAILRNMALAATGSVSYLSTLYTNQSVTAEAKALKAAGMGGATPMLDRTETALNNIRHPNRESLPHTFQ KSTLSGIPRVAENAYHMGRGALQLPTQMAVDTVRVVDEGVLNAVASAREALKQPTKDDDALRALEEGLLDPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hopM1 | NP_791202.1 | type III effector HopM1 | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| unnamed | AAF71501.1 | unknown | Not tested | Hrp PAI | Protein | 0.0 | 99 |
| unnamed | AAT96220.1 | HopPtoM-like protein | Virulence | T-PAI | Protein | 6e-173 | 55 |
| unnamed | AAT96166.1 | HopPtoM-like protein | Virulence | T-PAI | Protein | 4e-173 | 55 |
