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Name : shcE (PSPTO_1376) Accession : NP_791203.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III chaperone ShcE Function : - COG functional category : - COG ID : - EC number : - Position : 1513672 - 1514067 bp Length : 396 bp Strand : + Note : similar to GP:2978504, and GP:2978504; identified by sequence similarity; putative; previously known as AvrF (PMID 9448330; Bogdanove et al, 1998) DNA sequence : ATGACGATGAAAACTTCGCAACCCGATTTCGCCCGCTTCATCAATTCTCTGGGCGCCCAGCTCGGCACGTCACTGACCTT GCAGAACGGCGTATGCGCTCTTTATGACGGTCAGAACAACGAAGCGGCGATCATTGAATTGCCCGAGCACAGTGAGATGG TCATCTTTCATTGCCGCATTGGCCGCTGCCCGGAACGAGCCCCCGATTTGCTGCGTCTGTTGAGTCTGAACTTCGACGTA GCGCGCTTGCATGGCTGCTGGTTTGCGGTCGATCAGGGAGATGTCCGTCTATGCGCGCAGCGTGAACTGGCCTCACTCGA TGAGCCAGCGTTTTGTGACGTGACGCGCGGGTTCATTTCCCAGGCACGTGAAGCGCGTGCTTTTTTACAGGCTTGA Protein sequence : MTMKTSQPDFARFINSLGAQLGTSLTLQNGVCALYDGQNNEAAIIELPEHSEMVIFHCRIGRCPERAPDLLRLLSLNFDV ARLHGCWFAVDQGDVRLCAQRELASLDEPAFCDVTRGFISQAREARAFLQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71500.1 | unknown | Not tested | Hrp PAI | Protein | 8e-57 | 100 |
| shcE | NP_791203.1 | type III chaperone ShcE | Virulence | Hrp PAI | Protein | 1e-56 | 100 |
| avrF | AAT96165.1 | AvrF | Not tested | T-PAI | Protein | 5e-47 | 79 |
| avrF | AAT96219.1 | AvrF | Not tested | T-PAI | Protein | 5e-47 | 79 |
| avrF | AAT96271.1 | AvrF | Not tested | S-PAI | Protein | 2e-34 | 59 |
| avrF | AAT96312.1 | AvrF | Not tested | S-PAI | Protein | 2e-34 | 59 |
| avrF | AAT96351.1 | AvrF | Not tested | S-PAI | Protein | 2e-34 | 58 |
| avrF | ABA47300.1 | AvrF | Not tested | S-PAI | Protein | 1e-32 | 55 |
| dspF | AAC04851.1 | DspF | Virulence | Hrp PAI | Protein | 3e-23 | 43 |
