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Name : hrcC (PSPTO_1389) Accession : NP_791216.2 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : outer-membrane type III secretion protein HrcC Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 1528890 - 1530989 bp Length : 2100 bp Strand : + Note : similar to GP:3228547, GB:M96789, SP:P35212, and PID:183223; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:3228547, GB:M96789, SP:P35212, and PID:183223, identified by sequence similarity, putative DNA sequence : ATGCGCAAGGCCTTAATGTGGTTGCCTTTATTGTTGATCGGGGTGATCCCTGCCACGTGGGCGGTCACCCCAGAAGCCTG GAAACACACCGCCTACGCCTATGATGCCCGGCAGACCGAGTTGTCTACTGCCCTGGCTGACTTTGCCAGGGAGTTCGGCA TGTCGCTCGACATGTCGCCTGTCCAGGGCAAGCTCGATGGCCGTATTCGTGCTCAGAACCCTGAAGAGTTTCTTGAGCGG CTGAGTCAGGAATACCACTTCCAGTGGTTCGTCTATAACGACACGCTGTATGTCAGCCCTTCCAGCGAGCACACCTCGGC GCGCATCGAAGTCTCGCCGGATGCGGTGGACGACCTGCAAACGGCGCTGACCGATGTCGGTCTGCTGGACAAGCGTTTTG GCTGGGGCTCGCTGCCTGACGAAGGCGTGGTTCTGGTTCGTGGTCCGGCCAAATACGTGGAGTTTGTGCGCGACTACAGC AAGAAAGTCGAAAAGCCCGACGAGAAGGCCGACAAGCAAGATGTTGTCGTGCTGCCACTCAAATACGCCAACGCGGCTGA TCGGACTATTCGCTACCGTGACCAGCAGTTAGTGGTGGCCGGTGTCGCCAGTATTCTTCAAGAGCTGCTGGAAAGCCGTT CGCGTGGCGAAAGCATTGACAGCGTGAACCTGTTGCCGGGGCAGGGCAGCAGTGTTGCCAACAGCACAGGTGTCGCGGCC GCCGGCCTGCCTTACAACCTGGGCTCCAATGGTATCGATACGGGAGCACTGCAACAGGGCATTGACCGCGTATTGAACTT CAACAGCAAAAAAACTGCCAAGGGTCATGCCTCAGGCAAGGCAAATATCCGCGTAAGCGCTGATGTGCGTAACAACTCCG TATTGATTTACGACCTGCCAGAGCGCAAGGCCATGTACCAGAAACTGGTCAAGGAGCTGGACGTTCCGCGCAACCTGATC GAAATCGATGCGGTCATTCTCGACATCGACCGCAATGAACTGGCTGAACTGTCCAGTCGCTGGAATTTCAATGCCGGCAG CGTCGGAGGTGGTGCCAACCTGTTTGATGCAGGCACCAGTTCAACGTTGTTCTTGCAGAACGCCAGCAAGTTTTCTGCCG AATTGCATGCGCTTGAAGGCAATGGTTCTGCGTCAGTCATCGGCAACCCGTCGATCCTGACCCTGGAGAATCAGCCTGCA GTGATCGACCTCAGTCGCACCGAATACCTGACGGCCACTTCCGAGCGGGCCGCTGACATTCTGCCCATCACGGCGGGCAC CAGCCTTCAAGTGATTCCGCGTTCGCTGGACAACGATGGCAAGCCTCAGGTGCAAATGATCGTGGACATCGAGGATGGCC AGATCGATGTGTCGACGATCAATGACACCCAACCCAGTGTGCGCCGAGGCAATGTCAGCACCCAGGCGGTGATTGCCGAG CACGGCTCGCTGGTCATCGGCGGCTTCCACGGTCTGGAAGCCAATGACAGGATTCACAAGATCCCGCTGTTGGGCGACAT TCCCTATATCGGCAAGCTGCTGTTCCAGTCCCGCAGTCGCGAACTGAGTCAGCGCGAGCGGCTGTTCATTCTGACCCCTC GACTGATCGGCGATCAGGTCAATCCAGCACGCTATGTACAGAACGGCAACCCCCATGACGTCGATGACCAGATGAAGAAA ATCAAGGAACGACGTGACGGAGGCGAGCTGCCAACGCGGGGCGACATCCAGAAAGTCTTTACCCAAATGATCGACGGCGC CGCCCCGGAAGGCCTGCGCGCTGGCCAGACCCTGCCCTTTGAAACCGATAGTCTGTGTGATCCGGGCGAAGGTCTGACGC TTGATGGGCAGCGCTCGCAGTGGTTCGTCAAAAAAGACTGGGGTGTTGCTGTGGTGGTTGCGCGTAACAACACGGACAAG CCGGTACGTATCGACGAAAGCCGATGCGGCGGTCGCTGGGTCATCGGCGTTGCGGCCTGGCCTCATGCATGGCTGCAGCC GGGTGAAGAAAGTGAGGTGTACATCGCTGTGCGCCAGCCGCAGATATCTAAAATGGCCAAAGAAAGCAGGCCGTCACTGC TCCGGGGAGCGAAACCATGA Protein sequence : MRKALMWLPLLLIGVIPATWAVTPEAWKHTAYAYDARQTELSTALADFAREFGMSLDMSPVQGKLDGRIRAQNPEEFLER LSQEYHFQWFVYNDTLYVSPSSEHTSARIEVSPDAVDDLQTALTDVGLLDKRFGWGSLPDEGVVLVRGPAKYVEFVRDYS KKVEKPDEKADKQDVVVLPLKYANAADRTIRYRDQQLVVAGVASILQELLESRSRGESIDSVNLLPGQGSSVANSTGVAA AGLPYNLGSNGIDTGALQQGIDRVLNFNSKKTAKGHASGKANIRVSADVRNNSVLIYDLPERKAMYQKLVKELDVPRNLI EIDAVILDIDRNELAELSSRWNFNAGSVGGGANLFDAGTSSTLFLQNASKFSAELHALEGNGSASVIGNPSILTLENQPA VIDLSRTEYLTATSERAADILPITAGTSLQVIPRSLDNDGKPQVQMIVDIEDGQIDVSTINDTQPSVRRGNVSTQAVIAE HGSLVIGGFHGLEANDRIHKIPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQVNPARYVQNGNPHDVDDQMKK IKERRDGGELPTRGDIQKVFTQMIDGAAPEGLRAGQTLPFETDSLCDPGEGLTLDGQRSQWFVKKDWGVAVVVARNNTDK PVRIDESRCGGRWVIGVAAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 92 |
| hrcC | AAB05085.2 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 85 |
| hrcC | AAT96206.1 | HrcC | Virulence | T-PAI | Protein | 0.0 | 82 |
| hrcC | AAT96152.1 | HrcC | Virulence | T-PAI | Protein | 0.0 | 82 |
| hrcC | ABA47303.1 | HrcC | Virulence | S-PAI | Protein | 9e-142 | 47 |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 9e-139 | 46 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 4e-137 | 46 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 7e-137 | 46 |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 5e-136 | 45 |
