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Name : hrcT (PSPTO_1393) Accession : NP_791220.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 1533169 - 1533963 bp Length : 795 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:3282783, and GP:11276518; identified by sequence similarity; putative DNA sequence : ATGCCTCTGGACGCGCAGAATTTCTTCGATCTCATCCTCGGCATGGGCCTGGCAATGGCGCGTCTGGTGCCGTGCATGCT GCTGGTGCCGGCCTTTTGTTTCAAATACCTGAAAGGCCCACTGCGCTATGCGGTAGTGGCGGTGGTAGCGATGATCCCTG CGCCCGGCATCAGCCGCGCACTGACCTCACTCAATGACGACTGGTTTGCCATCGGCGGCCTGCTGCTCAAGGAAGTCGTG CTGGGCACGCTGCTGGGGATGCTGCTGTATGCGCCCTTCTGGATGTTCGCCTCGGTGGGCGCTCTGCTCGACAGCCAGCG CGGTGCACTCAGCGGCGGCCAGATAAACCCGTCGCTGGGGCCTGACGCTACGCCGCTGGGCGAGCTGTTTCAGGAAACCC TGGTCATGCTGGTGCTCATTTCAGGCGGTTTGTCTCTGATTACCCAGGTCATCTGGGACAGTTACATGGTCTGGCCGCCC ACTTCGTGGTTGCCAGGCATGACCGCGGAAGGCCTGGACGTGTTTCTCGGTCAGTTGAACCAGACCCTGCAACACATGAT GCTGTATGCCGCGCCCTTCATCGCGTTGCTGCTGTTGATCGAGGCCGCGCTGGCGATCATCGGGCTGTACGCGCAACAGC TGAACGTCTCGATTCTGGCCATGCCGGCCAAAAGCATGGCCGGTATCGCCTTTCTGCTGGTCTACCTGCCGACGCTGCTG GAATTGGGCACCGGCGAATTGTCGAAGCTGGCTGATCTCAAGTCGATACTGGGCTTTGTGGTGCAGGTGCCGTGA Protein sequence : MPLDAQNFFDLILGMGLAMARLVPCMLLVPAFCFKYLKGPLRYAVVAVVAMIPAPGISRALTSLNDDWFAIGGLLLKEVV LGTLLGMLLYAPFWMFASVGALLDSQRGALSGGQINPSLGPDATPLGELFQETLVMLVLISGGLSLITQVIWDSYMVWPP TSWLPGMTAEGLDVFLGQLNQTLQHMMLYAAPFIALLLLIEAALAIIGLYAQQLNVSILAMPAKSMAGIAFLLVYLPTLL ELGTGELSKLADLKSILGFVVQVP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 3e-86 | 100 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 3e-86 | 100 |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 3e-74 | 85 |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 3e-74 | 85 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 3e-76 | 83 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 3e-76 | 83 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 8e-39 | 50 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 5e-39 | 50 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 5e-39 | 50 |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 8e-38 | 49 |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 7e-27 | 46 |
