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Name : hrcQa (PSPTO_1397) Accession : NP_791224.1 Strain : Pseudomonas syringae DC3000 Genome accession: NC_004578 Putative virulence/resistance : Virulence Product : type III secretion protein HrcQa Function : - COG functional category : - COG ID : - EC number : - Position : 1535291 - 1536007 bp Length : 717 bp Strand : - Note : see PMID:20190049 for expression data; similar to GP:3282779, and GP:11276514; identified by sequence similarity; putative DNA sequence : ATGAGCGCCTTGTGCCTGCGCAAGGTCGACCCGCTGCTGGCTAAGGTCTCGCGTGAGCTGGGCGCCGGTCAATGCCTGAG CTTCAGCGCCAAGGGCCAACAGGCAGAGCTGACCTTGCTGCCGCTGATCGCCTCTGACGAGACACCTGCCAAGGGCGTCT GGTTGAACACCGCCGTCGGGGCGCTGTGCCTGAGCGATGCCGAAGCACTGCTGAGCCTGCTGGGCGATATCCCCCTGACG CTGGGCGGCGAACAGCAAGCCTGGTACTGGCAGTTTTTCAATCAACGCCTGAGCCCGACCATTGCCGATCTGCTGGCCCC GGTTGAGCCGCTGCCCCAGGCGTGTGCAGAGCTTACTGTCGGCTGCCGGATTCAGGTCCGGCTGGCCGATCAACAGGTCC ATGCCCACCTGCACGCAACGCCCGAGACGCTGCTCACGCTGCTGCGTTCCGCCGCCTGGCAAGCCCGGTTGAAACCTCTC GACGAGCGCTGGTCGATTAGCACGCCGCTGATCCTTGGCGAGCTATCGCTGACGCTTGAACAACTCGCTTCGCTGCGTCC TGGCGATGTGTTGCTGCCCGCCAACTGCAAGTTCGACAGCGCCGGACAGGGCTTTCTGACCCTGGCGGGACGGCAATGGG CAGCCCAGACCGACAGTCAGGACCAGCATCTTTTATTGCGGCTCAGCCACGAGGAGCACAGCCACCATGAGTACTGA Protein sequence : MSALCLRKVDPLLAKVSRELGAGQCLSFSAKGQQAELTLLPLIASDETPAKGVWLNTAVGALCLSDAEALLSLLGDIPLT LGGEQQAWYWQFFNQRLSPTIADLLAPVEPLPQACAELTVGCRIQVRLADQQVHAHLHATPETLLTLLRSAAWQARLKPL DERWSISTPLILGELSLTLEQLASLRPGDVLLPANCKFDSAGQGFLTLAGRQWAAQTDSQDQHLLLRLSHEEHSHHEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcQa | NP_791224.1 | type III secretion protein HrcQa | Virulence | Hrp PAI | Protein | 7e-96 | 100 |
| hrcQa | AAG33882.1 | HrcQa | Virulence | Hrp PAI | Protein | 1e-95 | 99 |
| hrpU2 | AAA81945.1 | HrpU2 | Virulence | Hrp PAI | Protein | 7e-70 | 68 |
| hrcQa | AAT96144.1 | HrcQa | Virulence | T-PAI | Protein | 2e-71 | 68 |
| hrcQa | AAT96198.1 | HrcQa | Virulence | T-PAI | Protein | 3e-72 | 68 |
| hrcQa | ABQ88357.1 | HrcQa | Virulence | Hrp PAI | Protein | 7e-70 | 68 |
