Gene Information

Name : PSPTO_1410 (PSPTO_1410)
Accession : NP_791236.1
Strain : Pseudomonas syringae DC3000
Genome accession: NC_004578
Putative virulence/resistance : Unknown
Product : exchangeable effector locus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1550627 - 1551043 bp
Length : 417 bp
Strand : +
Note : see PMID:20190049 for expression data; similar to GP:8037774, and GP:8037774; identified by sequence similarity; putative

DNA sequence :
ATGCGCGCGTATAAAAACCTGACGGCAAAGATCGGCGGCTTTCTGCTTGCGCTGACGATCATTGGCACTTCGCTACCTGC
ATTTGCCGTAAACGATTGTGATCTGGACAACGACAACAGCACCGGTGCCACGTGTGGCGGCAACGACAAGGATCTGGATA
ACGACAACGTGACTGACGCGGCATTTGGCGGCAACGACAAGGATATGGACAATGACCACCACACCGACGCGGCATTTGGG
GGTAACGACAAGGACCTGGACAACGATCACCATACGGATGCAGCGTTTGGCGGTAACGACAAAGATCTCGACAACGACAA
CAAAACCGATGCGGCTTTCGGTGGAAATGACCGCGATCTTGATAACGACAACAACACCGACAACTACAACGGCACGCCGT
CTGCCGCTAAAAAGTAG

Protein sequence :
MRAYKNLTAKIGGFLLALTIIGTSLPAFAVNDCDLDNDNSTGATCGGNDKDLDNDNVTDAAFGGNDKDMDNDHHTDAAFG
GNDKDLDNDHHTDAAFGGNDKDLDNDNKTDAAFGGNDRDLDNDNNTDNYNGTPSAAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71485.1 unknown Not tested Hrp PAI Protein 2e-40 100
PSPTO_1410 NP_791236.1 exchangeable effector locus protein Not tested Hrp PAI Protein 3e-40 100
unnamed AAN85181.1 unknown Not tested Hrp PAI Protein 9e-37 90
unnamed AAN85191.1 unknown Not tested Hrp PAI Protein 4e-36 88
unnamed AAN85176.1 unknown Not tested Hrp PAI Protein 2e-34 87
unnamed AAT96184.1 Pspto1410-like protein Not tested T-PAI Protein 3e-30 77
unnamed AAT96130.1 Pspto1410-like protein Not tested T-PAI Protein 3e-30 77